PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_1044_iso_5
Organism
Catharanthus roseus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family VOZ
Protein Properties Length: 196aa    MW: 22795.4 Da    PI: 9.1003
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_1044_iso_5genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ250.82.2e-771113692217
                                  VOZ  92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssf 165
                                           +elfdl++legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp++s+
  cra_locus_1044_iso_5_len_1269_ver_3  11 GTELFDLAVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMKSY 84 
                                          58************************************************************************ PP

                                  VOZ 166 ewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                          ewhlyeyein++d +alyrlelklvd+kks+kgkv++ds++dlqk++ +lta
  cra_locus_1044_iso_5_len_1269_ver_3  85 EWHLYEYEINKYDVCALYRLELKLVDGKKSPKGKVANDSVSDLQKQMKKLTA 136
                                          **************************************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
XSLSLSFFFF GTELFDLAVL EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR  60
KQVMNEFGGL KRSYYMDPQP MKSYEWHLYE YEINKYDVCA LYRLELKLVD GKKSPKGKVA  120
NDSVSDLQKQ MKKLTAEFPS DNKRTVKGNS KANTKDVNGS IHSNPNRMPQ TNEAFDYGTG  180
APFEYLVDNL NGYYIT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027111836.11e-115transcription factor VOZ1-like
RefseqXP_027111837.11e-115transcription factor VOZ1-like
RefseqXP_027111838.11e-115transcription factor VOZ1-like
RefseqXP_027111839.11e-115transcription factor VOZ1-like
SwissprotQ9SGQ02e-88VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A068TU111e-113A0A068TU11_COFCA; Uncharacterized protein
STRINGXP_009589156.11e-107(Nicotiana tomentosiformis)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]