PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_5226_iso_3
Organism
Catharanthus roseus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family ERF
Protein Properties Length: 56aa    MW: 6582.42 Da    PI: 10.0562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_5226_iso_3genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.43e-073353223
                                 AP2  2 gykGVrwdkkrgrWvAeIrdps 23
                                         y GVr ++ +g+++AeIrd +
  cra_locus_5226_iso_3_len_289_ver_3 33 SYIGVRKRP-WGKYAAEIRDST 53
                                        699******.**********43 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.1773356IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-73354IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    Send to blast
MESSLWSNEN NISFKINEEV LLKEEHKINK SKSYIGVRKR PWGKYAAEIR DSTRNG