PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

cra_locus_56316_iso_2

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

bZIP

Protein Properties

Length: 93aa MW: 10894.9 Da PI: 4.4679

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_56316_iso_2	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.2	1.3e-06	2	35	20	53
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 20 sRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 sR RK++ +eeL +L+++N+ +++++ cra_locus_56316_iso_2_len_277_ver_3 2 SRMRKQQHVEELMSQLTQLQNQNTIWRERIDAVG 35 9***************************999765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.9E-5	2	33	No hit	No description
CDD	cd14702	1.26E-7	2	39	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence Send to blast
XSRMRKQQHV EELMSQLTQL QNQNTIWRER IDAVGRNYRG VDAENNVLRA QIAELTERLD 60 SLNSLTRFWA DANGFDVDIP EIPDTLLEPW QLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009774669.1	2e-54	PREDICTED: ocs element-binding factor 1-like
Refseq	XP_016485106.1	2e-54	PREDICTED: bZIP transcription factor 53-like
TrEMBL	A0A2G3DI25	2e-53	A0A2G3DI25_CAPCH; Uncharacterized protein
STRING	XP_009774669.1	6e-54	(Nicotiana sylvestris)