PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

cra_locus_58492_iso_1

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

bZIP

Protein Properties

Length: 104aa MW: 11446.3 Da PI: 10.0997

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_58492_iso_1	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.2	3.2e-07	65	99	7	42
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 e +++k A rsR RK+++i++Le+ v++L++e cra_locus_58492_iso_1_len_310_ver_3 65 EAKRAK-QHNAHRSRVRKLQYIAHLERTVQNLQTEG 99 555555.33489********************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-5	74	101	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
RPGGLQFKHG EIASMESKKV DEVSEEVGTT IAVEQRREEN SSKSPEGSAD RAGGSQAKPS 60 SSKTEAKRAK QHNAHRSRVR KLQYIAHLER TVQNLQTEGS EISX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096456.1	7e-26	uncharacterized protein At4g06598-like isoform X1
Refseq	XP_020554123.1	3e-26	uncharacterized protein At4g06598-like isoform X2
Refseq	XP_020554126.1	3e-26	uncharacterized protein At4g06598-like isoform X2
TrEMBL	A0A2G9GK01	3e-26	A0A2G9GK01_9LAMI; Uncharacterized protein
STRING	Migut.C01294.1.p	3e-23	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11445	20	23