PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

cra_locus_7162_iso_1

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

BES1

Protein Properties

Length: 169aa MW: 19526.2 Da PI: 10.3192

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_7162_iso_1	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	121.1	1.5e-37	36	109	3	76
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 + r p++kEr nnk+RER+RRai+ i+aGLRa+Gny+lpk D n+ l+ALc+eAGw ve+DGt yrk + p+ cra_locus_7162_iso_1_len_1220_ver_3 36 KLRFPSEKERLNNKQRERKRRAITHNIFAGLRAHGNYQLPKNPDSNDLLRALCEEAGWHVEEDGTIYRKVTWPP 109 6799*****************************************************************98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.5E-34	37	110	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045492	Biological Process	xylan biosynthetic process
GO:0005794	Cellular Component	Golgi apparatus
GO:1990538	Molecular Function	xylan O-acetyltransferase activity

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MGEEYERNSV LRGCIKKTKG PWVVRRATKN RGTVTKLRFP SEKERLNNKQ RERKRRAITH 60 NIFAGLRAHG NYQLPKNPDS NDLLRALCEE AGWHVEEDGT IYRKVTWPPF SLFPSPVVIF 120 GFKNLILASI FXQEPALKAP NLMEMDSSFQ ALVDDQNYCT QGMIKWKSP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-13	57	104	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-13	57	104	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-13	57	104	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-13	57	104	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017976358.1	3e-50	PREDICTED: protein BZR1 homolog 3
Refseq	XP_021289023.1	1e-49	protein BZR1 homolog 4-like
TrEMBL	A0A068UD63	3e-51	A0A068UD63_COFCA; Uncharacterized protein
STRING	EOY07087	1e-49	(Theobroma cacao)