PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

cra_locus_7162_iso_3

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

BES1

Protein Properties

Length: 192aa MW: 21934.8 Da PI: 8.731

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_7162_iso_3	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	120.9	1.7e-37	36	109	3	76
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 + r p++kEr nnk+RER+RRai+ i+aGLRa+Gny+lpk D n+ l+ALc+eAGw ve+DGt yrk + p+ cra_locus_7162_iso_3_len_768_ver_3 36 KLRFPSEKERLNNKQRERKRRAITHNIFAGLRAHGNYQLPKNPDSNDLLRALCEEAGWHVEEDGTIYRKVTWPP 109 6799*****************************************************************98887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.7E-34	37	110	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045492	Biological Process	xylan biosynthetic process
GO:0005794	Cellular Component	Golgi apparatus
GO:1990538	Molecular Function	xylan O-acetyltransferase activity

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MGEEYERNSV LRGCIKKTKG PWVVRRATKN RGTVTKLRFP SEKERLNNKQ RERKRRAITH 60 NIFAGLRAHG NYQLPKNPDS NDLLRALCEE AGWHVEEDGT IYRKVTWPPF SLFPSPVVIF 120 GFKNLILASI FXQEPALKAP NLMEMDSSFQ ALVDDQNYCT CEDKKMESEF VADFCQKSSL 180 GAGNDTDLTL SI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-13	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-13	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-13	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-13	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795965.1	5e-51	PREDICTED: uncharacterized protein LOC104242587
TrEMBL	A0A068UD63	2e-52	A0A068UD63_COFCA; Uncharacterized protein
STRING	XP_009795965.1	2e-50	(Nicotiana sylvestris)