PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

estExt_fgenesh1_pg.C_Chr_04.00010098

Common Name

Ot04g01600, OT_ostta04g01490

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus

Family

Protein Properties

Length: 264aa MW: 29329.2 Da PI: 6.7024

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
estExt_fgenesh1_pg.C_Chr_04.00010098	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.3	3.2e-08	45	105	2	62
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 k ++ rrk+ NRe+A+rs RKkae ++L +++L + +++k++ +l+k+v++l +e estExt_fgenesh1_pg.C_Chr_04.00010098 45 KLVRMYRRKIANRESAKRSKIRKKAEDAKLLSAAETLLQDAATMRKTITTLQKKVDTLYAE 105 5567789************************************************999766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.1E-7	42	102	No hit	No description
SMART	SM00338	5.0E-7	44	108	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.8E-7	44	105	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.933	46	109	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.37E-5	48	103	No hit	No description
CDD	cd14702	1.36E-11	51	100	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MSNDTTSVLT MLDGPLRTAT VGELTKLGIS IEGLRDDMDP KEREKLVRMY RRKIANRESA 60 KRSKIRKKAE DAKLLSAAET LLQDAATMRK TITTLQKKVD TLYAENVKLR QRLGDQVGEH 120 EEKPPSVIEP VELPPEVETP SLVMKEARKK KRGMLKSQSD SSIATTFEEA DDPEPAMKRV 180 AVHETTNIRQ HARDGAHANS GAKPPRHANG DRLLDDIQFG MDGFYGDFGN DIRSASPFLT 240 NNYAMYTFNE GEILGSDLGA WDV*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003078678.1	0.0	Basic-leucine zipper domain
TrEMBL	A0A1Y5IL07	0.0	A0A1Y5IL07_OSTTA; Uncharacterized protein
TrEMBL	Q01B88	0.0	Q01B88_OSTTA; Basic-leucine zipper domain
STRING	Q01B88	0.0	(Ostreococcus tauri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP9223	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	1e-09	basic region/leucine zipper transcription factor 68

Link Out ? help Back to Top
Entrez Gene	9834251

Publications ? help Back to Top
Derelle E, et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52 [PMID:16868079]