PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.TU.contig_40576.1

Organism

Carica papaya

Taxonomic ID

3649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

G2-like

Protein Properties

Length: 137aa MW: 15000.9 Da PI: 4.3371

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.TU.contig_40576.1	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	23.1	1.7e-07	113	131	1	19
G2-like 1 kprlrWtpeLHerFveave 19 k+r++Wt eLH++Fv+av+ evm.TU.contig_40576.1 113 KNRIVWTDELHNKFVHAVD 131 68****************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	9.3E-6	112	132	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
MDKYQFLETM TPVSQLPVIV MSTDQDENGM LGSLQCGAEF HLELSRSASS SSSSDQGVSS 60 SAAESLHIFN NINLESNDDE ESDANHSGSK RKQPENSSSR SSDDNSDSSI VKKNRIVWTD 120 ELHNKFVHAV DFPGAQX

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.TU.contig_40576.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021903262.1	2e-49	two-component response regulator ARR14-like
STRING	evm.TU.contig_40576.1	6e-95	(Carica papaya)

Link Out ? help Back to Top
Phytozome	evm.TU.contig_40576.1