PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_1195.2
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family WRKY
Protein Properties Length: 119aa    MW: 13073.8 Da    PI: 6.6242
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_1195.2genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.76.5e-102273459
                                  -EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY 34 vkkkversaedpkvveitYegeHnhe 59
                                  vkk+vers +dp++v++tYeg+Hnh+
  evm.model.supercontig_1195.2  2 VKKRVERSFQDPSTVITTYEGQHNHQ 27
                                  8************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007740.0044128IPR003657WRKY domain
SuperFamilySSF1182901.7E-6129IPR003657WRKY domain
PROSITE profilePS5081112.151129IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-8229IPR003657WRKY domain
PfamPF031061.4E-5227IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MVKKRVERSF QDPSTVITTY EGQHNHQCPA TLRGSAAGMF SPSLLTGSAL SVAPSFPQEL  60
LLTHLLPTPN SNTGNGEPSS MFYHQNFTPP LQHPQLQIPD QYDLLQDLLP AFIDKHHP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_1195.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021894797.13e-81probable WRKY transcription factor 71
TrEMBLA0A067F4B52e-38A0A067F4B5_CITSI; Uncharacterized protein
TrEMBLA0A2H5QUL42e-38A0A2H5QUL4_CITUN; Uncharacterized protein
TrEMBLV4TKS72e-38V4TKS7_9ROSI; Uncharacterized protein
STRINGevm.model.supercontig_1195.21e-81(Carica papaya)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.13e-15WRKY DNA-binding protein 71