PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_12.16
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family NZZ/SPL
Protein Properties Length: 352aa    MW: 37680.1 Da    PI: 7.5323
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_12.16genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE59.31.2e-182630329291
                       NOZZLE  29 vnssgeirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdr.. 108
                                  v+s  e + e+ +srgrkp    aq+kq     rgmgva+ler +++e  kk++  t+ ++  v     +   lp   d   
  evm.model.supercontig_12.16  26 VDSPPEDQIESPRSRGRKPSKVPAQKKQP---QRGMGVAQLERLRLQERWKKMTDITQVNALHVPNQFHSVPHLPFTTDSig 104
                                  57888899999********8777776654...5********************99999999999999999999999998644 PP

                       NOZZLE 109 gv.vlqgfps.....................slgs...srilcggvgsgqvmidp..vispwgfvets.atthelssisnpq 162
                                  gv vl g                         +g+     ++  g gsg +m+d   v +p   +     t++el si+   
  evm.model.supercontig_12.16 105 GVpVLHGGAYyagptiggdgllcldprmvahRIGNggfGGFY--GGGSGCLMMDQgrVGTPGSDMRVQiETAKELPSIQ--T 182
                                  555677755577898999999988886666533321123333..34789999995437788765554315689****97..5 PP

                       NOZZLE 163 mynassnnrcdtcfkkkrldgdqnnvvrsngggfskytmipppmngydeyllqsdhhqrsqgflydqriaraasvsaasasi 244
                                  m + s  +  d+c kkkr dg +      ng g  +y +         + ++  d+++ +  f  d+     a      ++ 
  evm.model.supercontig_12.16 183 MLQQSGPDCFDACSKKKRSDGLD---TGFNGSGKDQYGLSFFSSSKSCD-FVGVDREKNAGTFNGDHFNGFGA----VKSTK 256
                                  9999999988***********98...678********998555444444.57888777777777787766665....55566 PP

                       NOZZLE 245 npyfneatnltgsreefgsvlegnp.rngsrgvkeyeffpgkydervs 291
                                   p f    +   + e +    +gn   ng   v eyeffpgk  e+  
  evm.model.supercontig_12.16 257 SPLFASR-DSNEQVEVMAIHRKGNCdENGGSLVMEYEFFPGKTSEKII 303
                                  7888643.33446777777788886379999***********998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087441.4E-1326302IPR014855Plant transcription factor NOZZLE
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048653Biological Processanther development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MATSNSSLLF KAAEQSNAAN QEEPKVDSPP EDQIESPRSR GRKPSKVPAQ KKQPQRGMGV  60
AQLERLRLQE RWKKMTDITQ VNALHVPNQF HSVPHLPFTT DSIGGVPVLH GGAYYAGPTI  120
GGDGLLCLDP RMVAHRIGNG GFGGFYGGGS GCLMMDQGRV GTPGSDMRVQ IETAKELPSI  180
QTMLQQSGPD CFDACSKKKR SDGLDTGFNG SGKDQYGLSF FSSSKSCDFV GVDREKNAGT  240
FNGDHFNGFG AVKSTKSPLF ASRDSNEQVE VMAIHRKGNC DENGGSLVME YEFFPGKTSE  300
KIIKEKRGWP AEASVNAMSN GEASNHLTTS TASYANSSSD PATSIDLSLK L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_12.16
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021905958.10.0protein SPOROCYTELESS-like
TrEMBLA0A482CNM50.0A0A482CNM5_CARPA; SPOROCYTELESS-like EAR-containing protein 1
STRINGevm.model.supercontig_12.160.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2404422
Representative plantOGRP1001058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.14e-12sporocyteless (SPL)