PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_169.18
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family WRKY
Protein Properties Length: 127aa    MW: 14238.9 Da    PI: 8.6872
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_169.18genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.61.9e-11106126222
                                   --SS-EEEEEEE--TT-SS-E CS
                          WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                                   dDgy+WrKYGqK++k+s++pr
  evm.model.supercontig_169.18 106 DDGYKWRKYGQKSIKNSPNPR 126
                                   8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081112.817100126IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.3E-10101126IPR003657WRKY domain
SuperFamilySSF1182901.44E-8103126IPR003657WRKY domain
PfamPF031061.9E-7106126IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MEEDQNLRSC SDGGEELVNE LLDNESPFMV VEKDHRVINH GESKSKSNSH LISSTLYNYS  60
GPTIQHVQDA LLLTASRRFP AMGRGFRQSE SKYTLKIKSC GNGMADDGYK WRKYGQKSIK  120
NSPNPR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_169.18
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021888384.12e-90probable WRKY transcription factor 49 isoform X2
TrEMBLA0A1Q3C8L61e-32A0A1Q3C8L6_CEPFO; WRKY domain-containing protein
STRINGevm.model.supercontig_169.181e-90(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM94052637
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.14e-21WRKY DNA-binding protein 49