PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_2741.1
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 105aa    MW: 12165 Da    PI: 8.2358
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_2741.1genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.61e-21264163
                                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                  e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN  L+ e++++k e+++l +e+
  evm.model.supercontig_2741.1  2 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAESLKEENGNLRAEVNRIKCEYEQLVAEN 64
                                  89********************************************************98887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-16160No hitNo description
PfamPF001704.0E-19264IPR004827Basic-leucine zipper domain
SMARTSM003383.1E-20266IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.013467IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-11561No hitNo description
CDDcd147026.27E-13757No hitNo description
PROSITE patternPS000360924IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
DERELKRQRR KQSNRESARR SRLRKQAECD ELAQRAESLK EENGNLRAEV NRIKCEYEQL  60
VAENNSLKAR LGEIPGHEDI RSGRNDQHSS NEAQQTGQTE TAQSX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824RRSRLRK
21825RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_2741.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021887293.11e-67bZIP transcription factor 68-like, partial
SwissprotQ84LG29e-31BZP68_ARATH; bZIP transcription factor 68
TrEMBLA0A061G6P82e-51A0A061G6P8_THECC; BZIP domain class transcription factor isoform 1
STRINGevm.model.supercontig_2741.13e-67(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2683933
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-32basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]