PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_3.213
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 211aa    MW: 23567.8 Da    PI: 9.9313
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_3.213genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1496154563
                                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                  +r rr+++NRe+ArrsR RKk +ieeL+  v++L + N++L +++ +l +   ++ +e+
  evm.model.supercontig_3.213  96 RRIRRMASNRESARRSRMRKKRQIEELQSQVDQLLTMNHQLSEKVIRLLESNHQVMQEN 154
                                  799******************************************99999888877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-1692156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-1293150No hitNo description
PROSITE profilePS5021711.41594157IPR004827Basic-leucine zipper domain
PfamPF001707.5E-1296153IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-1196148No hitNo description
CDDcd147027.39E-1597148No hitNo description
PROSITE patternPS00036099114IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MEAREMKILT APSHVSSLPN SLPLCSTPPP SSQLIINKQP CSHEFSLDHS NTSAAFFNRF  60
LSPLQIFSPN TTSSLSGDSA LIDGNKEQPA NIIDERRIRR MASNRESARR SRMRKKRQIE  120
ELQSQVDQLL TMNHQLSEKV IRLLESNHQV MQENGQLKEK VSSLQLVLSD ILTPLRSNVE  180
QEMSRGVNHI RGVEASNQSA IMDLVSRKGA *
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_3.213
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021909366.11e-151basic leucine zipper 43-like
TrEMBLA0A2C9VQA53e-46A0A2C9VQA5_MANES; Uncharacterized protein
STRINGevm.model.supercontig_3.2131e-150(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Representative plantOGRP1181045
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-41basic leucine-zipper 70