PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_34.221
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 242aa    MW: 26736.2 Da    PI: 9.0397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_34.221genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.21.7e-13189232548
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                                   +r rrk+kNRe+A rsR+RK+a+  eL  kv  Le+eN +Lkke
  evm.model.supercontig_34.221 189 RRLRRKIKNRESAARSRARKQAYHNELVSKVSHLEEENIRLKKE 232
                                   5889**************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-5184236IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.783187232IPR004827Basic-leucine zipper domain
PfamPF001704.3E-11189232IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.56E-10189232No hitNo description
Gene3DG3DSA:1.20.5.1709.3E-13189232No hitNo description
CDDcd147071.74E-17189238No hitNo description
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MGSQSNGLQS HLHPSSLVRQ NSWYSLTLNE VEDQLGNLGK PLGSMNLDEL LKNVWTTEAT  60
QSMGIEITSP ASSLQRQASL SLARALSGKT VDQVWKEIQQ GQKKRYGDDL VGREPILGEV  120
TLEDFLVQAG LFAEASLSPS MDLDSVDAAI KQSFPQQTVL SPAPITTLLG TATPGRKRDQ  180
EAIERSIERR LRRKIKNRES AARSRARKQA YHNELVSKVS HLEEENIRLK KEKFDSCSIP  240
G*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_34.221
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021901007.11e-169ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_021901008.11e-169ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_021901010.11e-169ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3
SwissprotQ9LES36e-56AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A2H5PEP71e-119A0A2H5PEP7_CITUN; Uncharacterized protein
TrEMBLV4U6F21e-119V4U6F2_9ROSI; Uncharacterized protein
STRINGevm.model.supercontig_34.2211e-176(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167141012
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.16e-49ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]