PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_41.99
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 191aa    MW: 21188.8 Da    PI: 9.8098
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_41.99genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.16.1e-11143188151
                      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                  k+r++W+p LH +F    + L G ++A Pk++l +m+v+ Lt ++++S LQ
  evm.model.supercontig_41.99 143 KQRMVWNPYLHLKF----NTL-GDKEARPKSLLTFMDVPELTQNQIASCLQ 188
                                  79************....89*.9999************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.35E-5140188IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.8E-10141188IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-7143188IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MKKKRSDEIE SNARATNCVH QENKDQSLGK GVLEDVKINE GATMSTSRKE VVNTDPKDSK  60
GKKKRMDQGD NGNGVEKNQA TMNPLKMSQV SQSAPVSNRK EPKVGAGNEK SKVRKTKFSY  120
ENISGNATGE DDEEDKGENC AKKQRMVWNP YLHLKFNTLG DKEARPKSLL TFMDVPELTQ  180
NQIASCLQIK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_41.99
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021896130.12e-46uncharacterized protein LOC110813352
STRINGevm.model.supercontig_41.991e-138(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP8222311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-08G2-like family protein