PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_55.155
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 218aa    MW: 24358.9 Da    PI: 5.4302
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_55.155genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-2092142155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++y+GVr ++ +g+W+Ae rdp+    r +r++lg+f+t+eeAa+a+++a+ +++g
  evm.model.supercontig_55.155  92 KKYRGVRHRP-WGKWAAETRDPR----RgQRVWLGTFDTPEEAARAYDRAAIEFRG 142
                                   59*****888.*******99983....46************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.17E-3192150No hitNo description
SuperFamilySSF541717.19E-2393151IPR016177DNA-binding domain
PROSITE profilePS5103224.65893150IPR001471AP2/ERF domain
SMARTSM003808.5E-3793156IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-3093150IPR001471AP2/ERF domain
PfamPF008472.3E-1493142IPR001471AP2/ERF domain
PRINTSPR003671.5E-1194105IPR001471AP2/ERF domain
PRINTSPR003671.5E-11116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MAHCPKPGPE RKRNRLPTPS ATRQLTRDTE NQIIVSALLH VISGNATHDS SMQRDPPDDI  60
VALPLDASTS FDPVLHTAGT DSCQQEEEDQ KKKYRGVRHR PWGKWAAETR DPRRGQRVWL  120
GTFDTPEEAA RAYDRAAIEF RGFKAKINFP FADYSQEQQL PARAEPELQR AVSVEAAGTR  180
EGESSSRQGV KDEDDDFGLG AIFSEEVIRK LMEETGQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-21931501472Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_55.155
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021897463.11e-161ethylene-responsive transcription factor ERF098-like
TrEMBLA0A2R6R5K11e-35A0A2R6R5K1_ACTCH; Ethylene-responsive transcription factor
STRINGevm.model.supercontig_55.1551e-160(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.15e-30ERF family protein