PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_71.10
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 220aa    MW: 25265 Da    PI: 10.5406
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_71.10genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483e-15114164256
                          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   y+GV++++ +g+Wv+eIr  p     +  r+ +g+++tae Aa a+++a+ kl+ e
  evm.model.supercontig_71.10 114 LYRGVTQRH-WGKWVVEIRLpP-----NkMRVLVGTYDTAEVAAYAYERAAYKLRRE 164
                                  59******9.**********88.....44*************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.78E-15113173No hitNo description
Gene3DG3DSA:3.30.730.101.0E-22114172IPR001471AP2/ERF domain
SMARTSM003801.8E-22114177IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-17114171IPR016177DNA-binding domain
PROSITE profilePS5103217.833114171IPR001471AP2/ERF domain
PfamPF008472.1E-9115163IPR001471AP2/ERF domain
PRINTSPR003675.5E-7115126IPR001471AP2/ERF domain
PRINTSPR003675.5E-7137153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MEVGFADRFH QLEDTLRWLI DVLMLNKEGS SSNAPSQTGQ TLPNCNAEKN DWPRLPFYSK  60
PKTFAFAGEM CRSIAAQTSQ ESRANTFFAR NPLINPPQSS VSASSYLCPM KKKLYRGVTQ  120
RHWGKWVVEI RLPPNKMRVL VGTYDTAEVA AYAYERAAYK LRRECTRLNF TNLKDPRKLG  180
FIDSTRLTAL KNSVDMKIQA ICQRVGRERR KLRERTEKH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206212RERRKLR
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_71.10
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021894819.12e-65ethylene-responsive transcription factor ERF061
SwissprotQ9C7W23e-32ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A4D9AEW62e-45A0A4D9AEW6_SALSN; EREBP-like factor
STRINGevm.model.supercontig_71.101e-165(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM41742551
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-27ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]