PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_86.52
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 355aa    MW: 38958.1 Da    PI: 5.9232
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_86.52genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.56.8e-09120166148
                      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkS 48 
                                  k+r++W+++L  +F  +v+ L   ++A Pk+ l +m+v+ Lt  +v+S
  evm.model.supercontig_86.52 120 KQRMVWNHDLELEFTAVVSAL-RDKEARPKSTLSFMDVPELTQPQVAS 166
                                  79*******************.8899********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-9118167IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGLETEMDIT LKALQDGVCF CLEKPISPQN VRDVWQHGIK KNRSNEIGSI KEGENDNGVG  60
ENQAKANPQS ILMLNRKEPN AGLGNGQSKV RKIRSAFENT SVNAVWEEGE EDKGGNCAKK  120
QRMVWNHDLE LEFTAVVSAL RDKEARPKST LSFMDVPELT QPQVASRKRV QVGSSYEVHN  180
NNSFLQIGDS LNNASRVQVG SSHEVQNNNS LLQIGTSSNN VQNNASRVQV GSSCEVHDNN  240
SLLQVGSSLN NVQNNASRAQ VGSSYGLQNN NMLLQPGSSL NWLQNNLPMF HPRPSFNFQN  300
NNAALQCESS LDVQDDEVSS IYRPQPEGMQ ETLLVLQQGS SSSSHGLWKN ISNL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_86.52
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021893863.10.0putative two-component response regulator-like APRR6
STRINGevm.model.supercontig_86.520.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP8222311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.15e-12response regulator 1