PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_86.64
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family WRKY
Protein Properties Length: 262aa    MW: 29890.4 Da    PI: 6.5797
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_86.64genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.82.5e-2496157159
                                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                  +dDg++WrKYGqK++ ++++prsY+rCt++   +C+++k+v++ ++dp +  +tY g+H+++
  evm.model.supercontig_86.64  96 VDDGFAWRKYGQKDILKANHPRSYFRCTHKtdqKCQATKQVQKIRDDPPLYRTTYYGHHTCK 157
                                  59***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-2683157IPR003657WRKY domain
SuperFamilySSF1182901.83E-2488157IPR003657WRKY domain
PROSITE profilePS5081120.85191154IPR003657WRKY domain
SMARTSM007743.0E-3796158IPR003657WRKY domain
PfamPF031061.6E-2497157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MAFNQIYAIE ELLRGHESAK KLQKLVNQPD LDSITKEDLV SEILESFENT LACYDGHKSS  60
EDSTESIRSK MRQDRRGSCE RRESPHVWTT EAVALVDDGF AWRKYGQKDI LKANHPRSYF  120
RCTHKTDQKC QATKQVQKIR DDPPLYRTTY YGHHTCKNFL NANHLVNESI QLGFSITNDS  180
IKRDHTPFSI SFPSSSSLKN ECKQEVLTTN NQLSSSSSNY LLSPDITTFE SCMPSTHHSL  240
EMDVMGKSIS VGFDEVFPFE F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-2296157869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_86.64
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021893877.10.0probable WRKY transcription factor 67
TrEMBLA0A061EIE61e-65A0A061EIE6_THECC; WRKY DNA-binding protein 70, putative isoform 1
STRINGevm.model.supercontig_86.640.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM167191012
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.19e-35WRKY DNA-binding protein 67