PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_9.174
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family C2H2
Protein Properties Length: 84aa    MW: 9130.11 Da    PI: 8.8983
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_9.174genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.8e-061235123
                                 EEETTTT.EEESSHHHHHHHHHHT CS
                      zf-C2H2  1 ykCpdCg.ksFsrksnLkrHirtH 23
                                 y Cp+C+ ++F++ ++L +H+r++
  evm.model.supercontig_9.174 12 YACPNCPnRVFPNLHSLSQHQRNC 35
                                 89********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MGKNSSKPPP TYACPNCPNR VFPNLHSLSQ HQRNCLVERS RRNTTSGATP VQYQEHTVYI  60
LESNPLPPQP PQSPTSTAES SNG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_9.174
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGevm.model.supercontig_9.1742e-53(Carica papaya)