PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00012_0330

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

bHLH

Protein Properties

Length: 981aa MW: 104319 Da PI: 6.5215

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00012_0330	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.9	2.3e-10	689	734	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RRd+i +++ +L +l+P++ K++Ka++Le+ +eY+ +q kfl00012_0330 689 HSVAERIRRDKITEKMRQLESLVPHR-----HKMDKASMLEEIIEYVIFMQ 734 999********************8.....6************97776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.96E-14	682	743	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.83E-11	682	738	No hit	No description
PROSITE profile	PS50888	14.824	684	733	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.8E-14	685	751	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.6E-8	689	734	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.0E-11	690	739	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence Send to blast
MSSNDRHGRQ SLGSDGSGHG DASSLLDAIF NLSQGGQQPG PDGGTGTGEA SQMLLPFSQQ 60 QPGLSLEATQ GRQSLEELHR TSFQTPLSHS NLPSFPNFSN LPSLPNLHNF PPQQNQAAPF 120 NPFSLTIPPA PFNSPARGPA SFTNSSLYST SLPSLASPTQ SSTTNKLNNL RLAIATRDPT 180 ESVEDVLSPR SLSFLHSHFQ SMGVELPASA SWGQIQQLLG QPRTPRSGLQ TSSSMFSERG 240 GGLGPPPQET PSLLSSFPAQ DNVQWNIPPP PPPGSGESVL DRFLATVNLP ANETNARITK 300 LAANLILQQQ QQQQEQQRLL RQQQIRQLQE SFHLHSQIPP LPTFQQQPSH HPPSLANFGG 360 LGGNISLGAG LLNPSHDPSA QISPMPPLPG LSKLTPQMTE LWQSALSKEN QGSLSAFLNT 420 QKFAAATAQQ LGRGGLQSPG YSVPDQVAQV IVGQQHTLPQ RVQGLSATQG GGSSEQGRQG 480 HQNLSSLVAP LTSDAMRRAL MAGGALSAQP AETSMGGSLS QGSIRTGKRG LSFRTESQYP 540 AETSMEEASA ESTPTDRKRQ RQGNSPAPSS RISYGAIPRA PTFNNRVSQV TIPPLPPTPA 600 LQFQTPLPLP NTALVPGIAR PAKPLGGGSP AQYSFPSPAR NEEQKGHAMT EVKGGGAQSV 660 GRGADVDKAR GETPVKLNRA KRGQATDPHS VAERIRRDKI TEKMRQLESL VPHRHKMDKA 720 SMLEEIIEYV IFMQLQVQVL SIGSQDTAQS VRETLPGGLP EVATRRGGVP PGNVTAATAA 780 AAPQVAAQLQ RSPEQAVRFL LDQGLCLVPA HLAAKLIEFP PEVLKQKSAA VPTAPRGPTS 840 TAALLASPMT VFPSETEGGR APAAVFSGWE EEEERAAEIK NKLREEDARE VADAIQEQEQ 900 RETRSESGLA SSPGVMGGAY KRPQTDEEQG VDQLTEMDSG QDFDAMSPGL GEGLDLPGFG 960 KGDSVHEAGH MAAMWDSDPH E

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence Send to blast

MSSNDRHGRQ SLGSDGSGHG DASSLLDAIF NLSQGGQQPG PDGGTGTGEA SQMLLPFSQQ  60
QPGLSLEATQ GRQSLEELHR TSFQTPLSHS NLPSFPNFSN LPSLPNLHNF PPQQNQAAPF  120
NPFSLTIPPA PFNSPARGPA SFTNSSLYST SLPSLASPTQ SSTTNKLNNL RLAIATRDPT  180
ESVEDVLSPR SLSFLHSHFQ SMGVELPASA SWGQIQQLLG QPRTPRSGLQ TSSSMFSERG  240
GGLGPPPQET PSLLSSFPAQ DNVQWNIPPP PPPGSGESVL DRFLATVNLP ANETNARITK  300
LAANLILQQQ QQQQEQQRLL RQQQIRQLQE SFHLHSQIPP LPTFQQQPSH HPPSLANFGG  360
LGGNISLGAG LLNPSHDPSA QISPMPPLPG LSKLTPQMTE LWQSALSKEN QGSLSAFLNT  420
QKFAAATAQQ LGRGGLQSPG YSVPDQVAQV IVGQQHTLPQ RVQGLSATQG GGSSEQGRQG  480
HQNLSSLVAP LTSDAMRRAL MAGGALSAQP AETSMGGSLS QGSIRTGKRG LSFRTESQYP  540
AETSMEEASA ESTPTDRKRQ RQGNSPAPSS RISYGAIPRA PTFNNRVSQV TIPPLPPTPA  600
LQFQTPLPLP NTALVPGIAR PAKPLGGGSP AQYSFPSPAR NEEQKGHAMT EVKGGGAQSV  660
GRGADVDKAR GETPVKLNRA KRGQATDPHS VAERIRRDKI TEKMRQLESL VPHRHKMDKA  720
SMLEEIIEYV IFMQLQVQVL SIGSQDTAQS VRETLPGGLP EVATRRGGVP PGNVTAATAA  780
AAPQVAAQLQ RSPEQAVRFL LDQGLCLVPA HLAAKLIEFP PEVLKQKSAA VPTAPRGPTS  840
TAALLASPMT VFPSETEGGR APAAVFSGWE EEEERAAEIK NKLREEDARE VADAIQEQEQ  900
RETRSESGLA SSPGVMGGAY KRPQTDEEQG VDQLTEMDSG QDFDAMSPGL GEGLDLPGFG  960
KGDSVHEAGH MAAMWDSDPH E

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HP83	0.0	A0A1Y1HP83_KLENI; Basic helix-loop-helix family protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-28	LJRHL1-like 3