PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00030_0070
Common NameKFL_000300070
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-PHD
Protein Properties Length: 1416aa    MW: 152206 Da    PI: 5.2346
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00030_0070genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.83.7e-08633680754
                    --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    +++   ++L++ F +n+ ps e+++eL ++l+L+ +qV  WF   R k
  kfl00030_0070 633 LEDVAYNVLKTSFLENQLPSLEKKQELCEQLKLPIDQVNRWFRGYRHK 680
                    55666789**********************************987766 PP
2PHD40.46.6e-14289342250
                    BTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHT CS
            PHD   2 CkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCke 50 
                    C+vC+    +++++++lCd gC+++fH++Cl++  +++++p +  +wlC+ C+ 
  kfl00030_0070 289 CAVCQTghVTTSNDILLCDgGCERAFHQYCLEPAITPDKMPADeeSWLCPACDV 342
                    ******88778********56**************9999998888*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579032.08E-13283346IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.106.0E-14284343IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS5001610.736286343IPR019787Zinc finger, PHD-finger
SMARTSM002498.8E-11288341IPR001965Zinc finger, PHD-type
PfamPF006281.2E-10289342IPR019787Zinc finger, PHD-finger
PROSITE patternPS013590289340IPR019786Zinc finger, PHD-type, conserved site
CDDcd155044.96E-21289340No hitNo description
Gene3DG3DSA:1.10.10.603.8E-10619675IPR009057Homeodomain-like
SMARTSM003890.0017624688IPR001356Homeobox domain
PROSITE profilePS5007112.115624684IPR001356Homeobox domain
SuperFamilySSF466893.55E-10625681IPR009057Homeodomain-like
PfamPF000461.0E-5632680IPR001356Homeobox domain
CDDcd000861.71E-6640680No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1416 aa     Download sequence    Send to blast
MPQGTRKCGC PARWCSCGGT VNKSELRTKT KVAAVRKAAS AAPPIGKPIQ SDSATKAQEG  60
VAKVAAAVED SKKNLLVGRP SAKLQNEVEP ALQRSEGDAK LIKKPLLKRG RSSAKSLGLD  120
AIAGQSLDKV KPEFGENINV SDKQPANKVH KSHKKKVLVG APVPPRPILR QRATDFKEIE  180
KVQDGEGNEQ EDMGTKKIVV PVSTGRLRSR IKTQIARIRR EEALLEAYSG SHEKLRPEEE  240
LLRARSQIHR SKLAIRGAVQ ELEVLMNHEI AEMAQKKERG RRKHEQVNCA VCQTGHVTTS  300
NDILLCDGGC ERAFHQYCLE PAITPDKMPA DEESWLCPAC DVKLDCIHAI NKQFGTKLLM  360
TSSWQDVFSE EAEQEAAGTS PKVPQSSEWP SDDSADEDYD PDKEDSGAKE GDSEGEETVP  420
GTEDQASRDS DTSDDDMDEE ISEEEAKALL EEVGPDAIGT EPAEVEERPE DLIIEGKRRR  480
TPVDYRILNF ALFGFDDVTD DSDEDEEGAA KKRRTKNALE EPLFTTDVTG APRPKADVGP  540
PQNDGALPQV KQEAEVETIV AAAGDADTGT KEREGEGAEP REAEGMKAEV ERAVEVKIEA  600
VESGEEEKPN GVLEAAGNAR TEQARASRYR PELEDVAYNV LKTSFLENQL PSLEKKQELC  660
EQLKLPIDQV NRWFRGYRHK VLTALNRPPD PESQAPGSKY PPWSLNEVAS EEAVERDRRV  720
NMVLKSTGKL RAALAKAAEL RQVARENGEE SSEADSPRCA EGRGILARLK RKAEGPEGFA  780
AKKGKRTAFG NAGADKSDEA RVLQSTLQRL AALDTRPLSV NGNRMGRPPI RMIELMAEVE  840
NLHGGQLPEL LAKHGGVKKP GARPPTLLQQ SLMRGRRELG ADSVGEDSQG LEGSDGSGSW  900
GSGRKKVRDE SGAAGEGVDD ALPRMGAPKL LKEEPRLQRG GSFNSNQSFD EDESGLEDSW  960
VAALDKRPFS KNGKRMGRPS RQVKEAILQF RREKHAAMGL PDDAGMDGAS AGTESTEERA  1020
RAPGDALPAK NGVLPRFSKS GKRIGRPPRA LRKPEAKAVA VSDAVPPAEP LHRSDSFGSL  1080
DGSTIGPDGV RYSKSGRRIG KPQRLGVVDS DELMQKQEEA PPFPAGPARR MTSILGSFDD  1140
LTAAIDHLEK PAAKVPRRER SADRVLDERA ILSGIRKRVA SSNKLSAFVT SSGNDVNERD  1200
SGVAAGAAAG SGEEAQSART GVNGPYDGAN RPHNPLESLF TAVTAHEERN EEMGEKVDGT  1260
ETGDESLAVE QLLIAVANPV MAMGFNLSST EEGLIPGLLV KSAPDPPAPV SDPPGTSSAP  1320
HEVTANGQES APVEDAGAGS SGEQFGASEV PSDILLGNTF SSSGDLAAMA ASLMSPVRRP  1380
DRPPRKGGKR AFSSIARVGS VPGIANLAAP SEGTSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1510515KKRRTK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9I6F10.0A0A0U9I6F1_KLENI; Putative PHD domain containing homeodomain protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18301539
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.13e-37Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]