PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00061_0230
Common NameKFL_000610230
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family bHLH
Protein Properties Length: 234aa    MW: 25304.4 Da    PI: 8.5024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00061_0230genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.2e-1555103255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++h+e+ErrRR+riN  + +Lr llP++     +K +Ka+ L ++++++k+Lq
  kfl00061_0230  55 SKSHSEAERRRRERINAHLGTLRNLLPHP-----TKADKASLLGEVIDHVKELQ 103
                    689**************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-1550109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-1553106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.57153102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-1255103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-1459108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.58E-466105No hitNo description
Gene3DG3DSA:3.30.70.2601.9E-6135193No hitNo description
CDDcd048732.59E-7139206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MESSKSGAGD PTLRNGDSGT PPAPALPPRL QAKDNSLSRA DSFQSKDGSS GESKSKSHSE  60
AERRRRERIN AHLGTLRNLL PHPTKADKAS LLGEVIDHVK ELQRQADEVA GEGVPSGGDK  120
VLVTLDEQEG AQVLKVAMSC EDRPELLTEV VKAIQRCKLR TLRAEMTTLG GRVRLDLLLG  180
SEEESKEQKL PKDVCKAVRD ALTAVIERNA SLSNPNWPES KRQKTGNGQT VTAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16166ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HS061e-167A0A0U9HS06_KLENI; Basic helix-loop-helix protein
STRINGGSMUA_Achr1P21280_0012e-37(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP37715106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-25bHLH family protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]