PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00064_0320

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Nin-like

Protein Properties

Length: 718aa MW: 77586.6 Da PI: 6.8466

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00064_0320	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	72.7	4.7e-23	603	651	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + ledl yF++p++dA+k Lgv++TvLKr+CR++ I+RWP+Rk+ks+ kfl00064_0320 603 VLMLEDLTPYFDMPMADACKALGVGATVLKRRCRELDIPRWPYRKVKSI 651 5789*******************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.212	587	672	IPR003035	RWP-RK domain
Pfam	PF02042	5.0E-21	605	651	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence Send to blast
MGLAVADVGG ESVEAKPGFK LVAIAIFQDQ NMQEDIRSVQ VYLQGGQYMA LQQGFCLSPT 60 GYYPLHEPIG MFFTNEADSL RFMARKKAEK DWACILDYAE YLPPPMSLNP LLSPTRNPRL 120 KQLPTLESDL AQVEAAIEYA SHGSEHSGTS SSVPEVGVPQ RLVGGALWPE TEPRGYEELF 180 LPTPSPQEGT PSEVERKDYS LDQRALDSLL LSPRAEFLTA FQRPPPPPRV SSSGALSSAH 240 ALAAAPPRPQ RSNLMLPPHS STPELSPLRA LLAHHGDNPL PGGSFLQPFS ANQPPPPRTT 300 LGTPGQTARI ARPLSTEGLV SPRYFDTRGA FASSGGLVST VAAVPVGSET SASDALASHR 360 APASEALSGV KEWVKVSFDS PEKRGRPPKT EVDLESIREF IRREAKRPML PGDQGTARND 420 QSVYQSLHAD NLLLQIGLEN PSPQNDWRTS SDPGGAQQRG ELGMLFRACS EPAFLSPGKS 480 PEDLDARQLN LPNTPGGQFR GWEHPPGDSP FAGRAVNGLL AQGFEGSAHM RRPASEPNLG 540 AFQALGANQG LVSSLWQPGN GVEVGPFEPG TLEAAESARL NIAEFLHSLP PSRGGATPRK 600 AAVLMLEDLT PYFDMPMADA CKALGVGATV LKRRCRELDI PRWPYRKVKS IDGLIQTIRE 660 LGDGNTSQQV ENALERLAGE KKRIAEQPSL GMAQETKKFR QACFKASHKI RKKSYPGA

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence Send to blast

MGLAVADVGG ESVEAKPGFK LVAIAIFQDQ NMQEDIRSVQ VYLQGGQYMA LQQGFCLSPT  60
GYYPLHEPIG MFFTNEADSL RFMARKKAEK DWACILDYAE YLPPPMSLNP LLSPTRNPRL  120
KQLPTLESDL AQVEAAIEYA SHGSEHSGTS SSVPEVGVPQ RLVGGALWPE TEPRGYEELF  180
LPTPSPQEGT PSEVERKDYS LDQRALDSLL LSPRAEFLTA FQRPPPPPRV SSSGALSSAH  240
ALAAAPPRPQ RSNLMLPPHS STPELSPLRA LLAHHGDNPL PGGSFLQPFS ANQPPPPRTT  300
LGTPGQTARI ARPLSTEGLV SPRYFDTRGA FASSGGLVST VAAVPVGSET SASDALASHR  360
APASEALSGV KEWVKVSFDS PEKRGRPPKT EVDLESIREF IRREAKRPML PGDQGTARND  420
QSVYQSLHAD NLLLQIGLEN PSPQNDWRTS SDPGGAQQRG ELGMLFRACS EPAFLSPGKS  480
PEDLDARQLN LPNTPGGQFR GWEHPPGDSP FAGRAVNGLL AQGFEGSAHM RRPASEPNLG  540
AFQALGANQG LVSSLWQPGN GVEVGPFEPG TLEAAESARL NIAEFLHSLP PSRGGATPRK  600
AAVLMLEDLT PYFDMPMADA CKALGVGATV LKRRCRELDI PRWPYRKVKS IDGLIQTIRE  660
LGDGNTSQQV ENALERLAGE KKRIAEQPSL GMAQETKKFR QACFKASHKI RKKSYPGA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HQG1	0.0	A0A1Y1HQG1_KLENI; RWP-RK domain-containing protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP567	17	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-27	RWP-RK domain-containing protein