PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00073_0220
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family B3
Protein Properties Length: 1116aa    MW: 119045 Da    PI: 5.6652
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00073_0220genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.5e-14893978183
                    EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
             B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                    f+kvlt sd++ +gr++lpk+ ae h    ++ke++  +t+ed + ++W++++++  ++ks+ yv++  + +Fv++ gL+ gD +v  
  kfl00073_0220 893 FEKVLTASDTSPLGRIILPKSQAELHlpkVLDKEGG-LITVEDADRNRWQLRYRFwpNNKSRIYVFE-HTADFVQSRGLRPGDYLVVC 978
                    99**************************96666555.9***************99655555558888.9***************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.0E-5379441IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-6384443IPR009057Homeodomain-like
Gene3DG3DSA:2.40.330.104.6E-22888995IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.27E-19890988IPR015300DNA-binding pseudobarrel domain
CDDcd100172.76E-19891976No hitNo description
PfamPF023623.0E-11893978IPR003340B3 DNA binding domain
PROSITE profilePS508639.756893993IPR003340B3 DNA binding domain
SMARTSM010194.9E-13893993IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009657Biological Processplastid organization
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0001076Molecular Functiontranscription factor activity, RNA polymerase II transcription factor binding
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1116 aa     Download sequence    Send to blast
MRPEAFEPAR SQGPVDTDAD SRSSSCRHAA ETGPPEVESA SRAGNVNSQG LVGTGVAEQL  60
DQLGDAMLAE VEAALAAEAR GDGFYGANKL GVNEFGVHEP RKLSRLASLD VLSEILSWEA  120
FGGSEKHEER GVVDSKVGVV DSRPRGGGVE SDVDNNEDDA VLASEKGGGD RQGGKDGVRG  180
DESHQVNRGD VTKVPASVES GGGILKSKSI ESEWGIALVK CGENAGGGTE DASSEGAVQE  240
LLKSYDRALD IKEKEERGGG APSTEPSSGL SQLGEMEVDQ ELMTALKSNV QLRDEHGTLE  300
RAGSGEGSGE QTGGWFGRGS GNRVSGNRLQ SRRPHSTPTS PVLSPLPSPK MTLRSQSFKE  360
SVQVGGYSRV PVDVPKPQPA GENQRMRFSP QQQKTLQEFG TKVNWVGPGV ESMEEAHQIC  420
AEMSMDIKQL KKWISNHRPK ELRSSSTPRP GVQPPWAIVP PLANSAFPGV YSEAALRGLS  480
AAHPALVGHP FYPPAPFFGG PQFPQGAWVP PHYAPGGQAM WPWPASGASL PPQASTPGGA  540
VPPPQQRSDA PGEGGGKPVD VKEIGPGGAE LVRGGSLEAN GGKQVPLDME RLANADNLRQ  600
VLGRKLKDFD PGKIQKLVEI CKTYRQKQSS DSPHERHDGP PKKKQLKSPP EVENQLPFPP  660
PLNLDSATPQ DEYQPQWGDT LLAESTPFGG RSDNLVADPT GWNMGDLANA PFANAPFENA  720
TTLQGDGRAK AEKGLPKPGL AYPNPSMHGE LAQAFDQNFL GGQPRDEMSL LPFPPPSNQF  780
LAHSAAGGPG QQTWPEPGFD AGLANGFFYN PAAHPAAFGA FSPLEMGLPA GGVPRPATSS  840
GKPPRTVRAL HMRGGCTAPF PGTDPKEWRV NEAPGLWVRG PVTPQPMRGK FLFEKVLTAS  900
DTSPLGRIIL PKSQAELHLP KVLDKEGGLI TVEDADRNRW QLRYRFWPNN KSRIYVFEHT  960
ADFVQSRGLR PGDYLVVCRA DEGHLILNDR RRPESPEGDP SERRATSEGS RSTVSSGSSC  1020
NRGTPDARTA SEHAESAALT SAAGLTSFRA GPPPLPLQQA GRQLSMEEVT RWAMSGDGHE  1080
MMDCVNLDHG EEPHVLELTQ ELQSLHSSGG LPRLGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A9e-2489010022116B3 domain-containing transcription factor FUS3
6j9b_D9e-2489010022116B3 domain-containing transcription factor FUS3
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00083PBMTransfer from AT3G24650Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HRB40.0A0A1Y1HRB4_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.11e-24B3 family protein