PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00086_0300
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family bHLH
Protein Properties Length: 504aa    MW: 54976.4 Da    PI: 9.7221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00086_0300genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.21.1e-16320366455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn+ ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+k+Lq
  kfl00086_0300 320 VHNQSERRRRDRINDRMRALQELIPNS-----NKTDKASVLDEAIEYLKNLQ 366
                    6*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-20313376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-19314375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.203316365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.61E-5319370No hitNo description
PfamPF000107.0E-14320366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-17322371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009704Biological Processde-etiolation
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MVTDGKGRVS SNPLQRAGSG SGELSVGQPE RNAPPAHRFG GDKSLEERQK ELQAELVQKQ  60
AEASAHLQRQ QLMRDQQHRH DMQRWGRGQI SPVQLPPDRP RTGFKQIQPK PAEGALYEAG  120
KGVPCYPPQS FMQQHAMAAE AMRLGRQSMD AGPSGQEGSV VLSSLSQERT NGPAPGATHV  180
PSVRAPAWAS LLQRGPVPHS PVVAPRGGRV GKERSSSGSR ALPDAAKAST LTGGRDSVNE  240
TTVTSSYSEG DSLATSRAYQ QNPLTVGRKR ERCAKSDTEA LEEDNDTLTE GTWITGETEG  300
RAAAKAGGKD KGKRSRAAEV HNQSERRRRD RINDRMRALQ ELIPNSNKTD KASVLDEAIE  360
YLKNLQTQLQ FMSMRTGLFA ANLPPGAPHP PAPPGMPGFS LPPMHPPSAH LPPMPSMHPP  420
LGMHSMPFLD HPMFANSPMM QHEEGAEMKP GRPYGDSNRE MYNAQEQQRE AGPFHPRLDL  480
YEGYQGHGHP SQQPSPRFDQ GGRQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324329ERRRRD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00081ChIP-seqTransfer from AT1G09530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I0M90.0A0A1Y1I0M9_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25816128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-16bHLH family protein