PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00123_0030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family NF-YC
Protein Properties Length: 302aa    MW: 33225.2 Da    PI: 4.1633
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00123_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC38.42.6e-121802521789
          NF-YC  17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdif 89 
                    ++  lPlarik+i+k d+d+k++s++a   ++ a elf+  l+  +   ++  kr+ +k  d+ +++++   +
  kfl00123_0030 180 AEIMLPLARIKRIVKLDPDIKQVSSDALKTIALATELFLGSLAESTAHVTRAGKRSMVKVEDLLQTIKSRRRY 252
                    5678**************************************9999999999************999987766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.104.4E-17177246IPR009072Histone-fold
PfamPF008087.8E-14183244IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
SuperFamilySSF471134.86E-14184252IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDDLKLNVNI NIAEPDQSAR SGAGHNPPEQ ADDGTIREDG DAEMGDVRDE KAANDEVGED  60
SRDEKYDDME EIETLKQKGM GSKDGEVVNN ETGALEAEPD FEEKEKDWDA EDEEVDAYAH  120
DEEIEADNVE EECNEEREAS DGVTEAQTGA QEGDETTGER EQDGNAAGTG KGQAEAAQKA  180
EIMLPLARIK RIVKLDPDIK QVSSDALKTI ALATELFLGS LAESTAHVTR AGKRSMVKVE  240
DLLQTIKSRR RYKECMGTDL EYLRPVDANQ AARQEARQAK AKEKAARELP PGVKPITNFF  300
KK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HVW20.0A0A1Y1HVW2_KLENI; DNA binding histone-like transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP94721213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-11nuclear factor Y, subunit C13