PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00124_0020
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family AP2
Protein Properties Length: 772aa    MW: 82641.9 Da    PI: 8.7538
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00124_0020genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.81.3e-13407458156
            AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                    s+++GV+++  +grW+A+I       g +k+ +lg ++t+eeAa+a+++ + + +g+
  kfl00124_0020 407 SKFRGVTRHQ-KGRWEARIGQlQ---G-KKYMYLGLYDTEEEAAAAYDREAIRQKGH 458
                    79*****999.7******77732...3.6********************99998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.719313372IPR001471AP2/ERF domain
SMARTSM003803.4E-11315378IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-9325373IPR016177DNA-binding domain
CDDcd000181.00E-11332372No hitNo description
Gene3DG3DSA:3.30.730.105.1E-10334372IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-17407467IPR016177DNA-binding domain
PfamPF008471.3E-8407455IPR001471AP2/ERF domain
CDDcd000188.54E-22407467No hitNo description
SMARTSM003801.8E-26408471IPR001471AP2/ERF domain
PROSITE profilePS5103215.817408465IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-16408465IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 772 aa     Download sequence    Send to blast
MLPTPSDKPG SQTDETHDAA TVASIIDAYY GPHARSEDAR TLNFLNDQGP DGRRPNTDAS  60
HPGSSGPAST PPTAGSSDLT QQGSFLHREK GPISPAVAVR SSPGEEEGIT KKNESLKAAV  120
GGIHSPLARG SAAFEGGPGS GEVAGEVREQ AALRSLLAEF QGSPADLLAL MQRDEEAEEA  180
EIEEGGSGLR RVTSSGSGGA ARMFDVEPLF SGGMMEALLG RMEEQRADED VSSPAKKMIL  240
RNSSLQVGKV LSPGSEGQSR ISHDDPMKTL STTPFPLRRS EEKPPNEKGG IEQQLVTEEP  300
AQRDPVVADT ISLSGGTKRR RLSERKRPEN STSRENGKQL YLGGFDSEEQ AALAYDIAAI  360
KCRGASAQTN LALENYRAHF DDISAVSKDE LVMSLRRHSK GFSRGSSKFR GVTRHQKGRW  420
EARIGQLQGK KYMYLGLYDT EEEAAAAYDR EAIRQKGHHA VTNFDISLLL SQQASQAVQR  480
QQEQQRAQSL QPPPFAPPPH AQLPPTSPPS LQASPRYAPP RARTPPSRPH SSPRQVRSPS  540
LRSPGASNRL RPQASSPTFS LSAALGQTPP GSPPYHRSQS WPRTQPLSGP YVGLGGFAPV  600
GPQPSAAVPA DVSLEQAALW RSVFGQPGGA HVGWGNVPMP QPSPSEFQPG AMPPQQRPAK  660
LVARRGPVEA PPLAAGSPPL GSGGGTGGAQ PVPQTEVEST RPGLAARRRM LRRRKMALSQ  720
MYHQQRQIDD LELVAPAEQS LQSQPSPYPG QEQPLEQEHL QGLGGLHPSS YE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317321KRRRL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4971784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.12e-38AINTEGUMENTA-like 5