PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00134_0260
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C3H
Protein Properties Length: 122aa    MW: 14065.6 Da    PI: 7.9107
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00134_0260genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.39.7e-124972326
                   S---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                   +e Cr+f r G+C yGdrCk++H+
  kfl00134_0260 49 REVCRNFVRQGFCTYGDRCKYHHP 72
                   899********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.25E-13345No hitNo description
PfamPF062201.2E-8438IPR013085Zinc finger, U1-C type
PROSITE profilePS5010315.144774IPR000571Zinc finger, CCCH-type
SMARTSM003564.7E-74773IPR000571Zinc finger, CCCH-type
SuperFamilySSF902296.41E-84975IPR000571Zinc finger, CCCH-type
PfamPF006421.5E-94972IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.107.8E-85073IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MPVPKYHCDY CDVTFRDSRE QRKRHQEGFN HRRNKKAWFD NIEGGVETRE VCRNFVRQGF  60
CTYGDRCKYH HPAQQPQEVQ LVQAAPIDAT NVWHGSQSDL PPSLQPPPPG GWPASAFTAD  120
WG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I1L92e-87A0A1Y1I1L9_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP85391213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.14e-16C3H family protein