PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00143_0060
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family AP2
Protein Properties Length: 794aa    MW: 82912.9 Da    PI: 4.726
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00143_0060genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.93.4e-10271318155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s++kGV+ +    rW A+I++      r+ ++lg+f t+e A +a+++a +k++g
  kfl00143_0060 271 SRFKGVTPH--HSRWQARIKEA-----RRDIHLGYFNTEEAAVRAYDRAVLKFRG 318
                    789***854..57********3.....5************************998 PP
2AP243.86.6e-14539585255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+++++  grW A+I+d      r+ ++lg+f+t+  Aa+a+++a+++++g
  kfl00143_0060 539 AYRGITRHH--GRWQARIKDQ-----RRDIHLGYFDTEIAAARAYDQAALRYRG 585
                    69****876..*********3.....5**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-11271325IPR016177DNA-binding domain
PfamPF008473.3E-4271318IPR001471AP2/ERF domain
CDDcd000183.98E-14271324No hitNo description
SMARTSM003803.2E-15272332IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-10272325IPR001471AP2/ERF domain
PROSITE profilePS5103212.457272326IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-15538593IPR016177DNA-binding domain
PROSITE profilePS5103215.909539593IPR001471AP2/ERF domain
SMARTSM003801.1E-20539599IPR001471AP2/ERF domain
PfamPF008471.5E-7539585IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-17539594IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    Send to blast
MAFQVDEFMN VPEDEVEAAE TGGAGEGQAV VEQGNGAETT QTLPAETVQV AEQAVTTDVG  60
QDVATQANDT GTKDAGTGAS ETEEAQPVAD VAAVAPAIIP PRVADPPVAE ASTVQKADAS  120
IQHEPLPGAS LYAFSERIEQ GSGDAPDEGV IDQGGELDAA MEAPPISMAV RQSMESDLAP  180
PLPAEPQVTK EAAPPTSAPH QQDPYNRPDL QLSMAALQQA ASILQSSNQT DASARNAVSD  240
ASQALQNVAL LQSMVRLLPT EGLKMKHGRP SRFKGVTPHH SRWQARIKEA RRDIHLGYFN  300
TEEAAVRAYD RAVLKFRGAE GLTNLCAADY EEPATVHTPT GVPGKVDAAT MTPIDCAESK  360
GANPLPHGYS PEQDDLLPGL MRCPKCGKMK TGDGTQPTTT AAAPPAAPGP PPPPPPRHAL  420
PRLKLPTVAE FWSAAAAALS PPNGIGALSP RDAAPAAQKS TTAGPSSSAP PMAPALPSQT  480
APPLFTRPRP EAIQNVLVHP VTSLATLAAM DALVLREAGI DPELFFNTQK RRALQRTSAY  540
RGITRHHGRW QARIKDQRRD IHLGYFDTEI AAARAYDQAA LRYRGTKAQL NFPETDYPPE  600
LKQEGERRVA AGALQDVEDP IIAQKRKELL GTLRAERAQA KRQKVLAQGG KPKARRVGGA  660
PGQPDAGELP AGWQGQQGGG LVGAEGTMPL EAVNTEGVQA SGVNGSAPVP VQPGLLQLPA  720
PGGELGQVGA EVAQSVAEVE MPGPIPVAES VSVAEDGMAG PIPVAAEVPG VEPWVPGGEG  780
PADQEIHATI PLQT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HYN60.0A0A1Y1HYN6_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4971784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.11e-11AP2 family protein