PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

kfl00150_0190

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Protein Properties

Length: 152aa MW: 16443.9 Da PI: 4.0547

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00150_0190	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	65	1.4e-20	35	115	18	98
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 +h+lPlar+k+++ka+ dv++++aea +l++ka elf+ +l+ ++ h + +r tl+ d++++v++ d +fl di p+ kfl00150_0190 35 EHKLPLARVKRLIKAESDVTQLTAEAGALITKATELFLEKLATQAARHMVDDSRVTLRYKDVSTTVKEEDSLEFLRDITPE 115 79****************************************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47113	1.27E-16	30	114	IPR009072	Histone-fold
Pfam	PF00808	1.5E-13	37	98	IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain
Gene3D	G3DSA:1.10.20.10	5.0E-23	38	114	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence Send to blast
MGDSAPDDRE GAGGAMEGQE QGGPSGAAAK HPALEHKLPL ARVKRLIKAE SDVTQLTAEA 60 GALITKATEL FLEKLATQAA RHMVDDSRVT LRYKDVSTTV KEEDSLEFLR DITPEPLTAI 120 QLAEGPENGE IDEESTDEDD DELAENENDE RT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5y26_B	4e-15	23	112	1	89	Putative transcription factor C16C4.22
5y27_B	4e-15	23	112	1	89	Putative transcription factor C16C4.22

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I225	1e-103	A0A1Y1I225_KLENI; Putative nuclear factor Y subunit C

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP315	17	117

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	1e-16	nuclear factor Y, subunit C4