PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00189_0180

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

WRKY

Protein Properties

Length: 1072aa MW: 114695 Da PI: 9.0234

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00189_0180	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.7	2.7e-29	360	417	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg+nWrKYGqK kg+++pr+YYrCt+a gCpv+k+v+rsa+dp+v+++tYe Hnh+ kfl00189_0180 360 DGCNWRKYGQKIAKGNPCPRAYYRCTQAaGCPVRKQVQRSADDPSVLVVTYEHMHNHP 417 9************************99**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	5.8E-29	345	417	IPR003657	WRKY domain
SuperFamily	SSF118290	3.79E-26	352	418	IPR003657	WRKY domain
PROSITE profile	PS50811	27.439	353	419	IPR003657	WRKY domain
SMART	SM00774	2.9E-36	358	418	IPR003657	WRKY domain
Pfam	PF03106	2.5E-26	360	417	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045892	Biological Process	negative regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1072 aa Download sequence Send to blast
MEALLNDESR SQGNNHSPLQ QEGSDNLYSG FIDRFPSFDS MFGPKQRRDS PQSSDAYTQR 60 ENERLSRARI EAEEIERLRK GALSPLKGAR AKMEDEMDAQ IRGGDRRNGA ALTRALNLSR 120 LGAPQQNWAP VKDEFNQRGL MKPAEDNQEK EAENGDMGFV DKEVTTWYSV SNRQAVGAGD 180 YATSAALIMQ QKLWEAMQEI QRLTEEGQAR EKLCAKLLQQ NAFLQAQIKQ YQDWSGLPAA 240 DRTRWKSPEP FAQPTHYKNE PRSPSLAPVD VPPVGNRPGG HQAGGALFER TTLGALSPHR 300 PLSPQCMRAD PLNLAVKPEA ERAVGHIPDM ENLQKVMQEN AEKSAKVALV MKSNAITIFD 360 GCNWRKYGQK IAKGNPCPRA YYRCTQAAGC PVRKQVQRSA DDPSVLVVTY EHMHNHPLSS 420 AAAPMAEATS SLASSYLCNV TSSNPNASAF AGVTASVDEG HASSNYAPNA NIPTITVDTI 480 NQAGSEWALR IAAARASAAL PNGGAKGETL NPQAKGAPSR AGVFSTVESV LKQQVKRAQA 540 AAPKDPAEPL NPRAKSLSGE KAQRTSSGEK KPKKKASSDS KGKAPLTLPV KAELMADAQT 600 PRFVQTLKTP RSAAASTTTT PFPPASPAVD APAGASLLTS LQTITERLQE LPGDEKPSGI 660 LEKLPTRGAK KRSRSRTVSA DTSVPVVPST TDDGARASAH GAAAFEASER GDQAVPEPPR 720 SLQLLRTSSR TSSDNLLHAL LSGAKYTPGP SPQNSCLQEQ GLSTLMGSGL SSFGLFAAAR 780 SGVKETDHDA DEVQSPRRSD GGAPDGDAAA KPQTSRVARP WPSYFQPGGS TVKGDKPTDA 840 SPEQSPLPWA SFHPFGLLSS TYNSYGTNFT PGPFTGGFGA HFSNRGNIFP FGPTPEMRDE 900 KTPGASAREE TAAAGGDVRG RPRSLSLNLG PVSPPMVSKS NGDPARTLEH QFDGDDSPLA 960 LVRRSPENNF TGLLTAVESP ANEELVRERK RARVASPGVE VGDREKVVVL DQEKRPGNAQ 1020 PGPAGTVGGE LPTFNLMGAA ITHGRIEVKT VENARLALEQ FLTAIRDTGL EK

Sequence ? help Back to Top

Protein Sequence Length: 1072 aa Download sequence Send to blast

MEALLNDESR SQGNNHSPLQ QEGSDNLYSG FIDRFPSFDS MFGPKQRRDS PQSSDAYTQR  60
ENERLSRARI EAEEIERLRK GALSPLKGAR AKMEDEMDAQ IRGGDRRNGA ALTRALNLSR  120
LGAPQQNWAP VKDEFNQRGL MKPAEDNQEK EAENGDMGFV DKEVTTWYSV SNRQAVGAGD  180
YATSAALIMQ QKLWEAMQEI QRLTEEGQAR EKLCAKLLQQ NAFLQAQIKQ YQDWSGLPAA  240
DRTRWKSPEP FAQPTHYKNE PRSPSLAPVD VPPVGNRPGG HQAGGALFER TTLGALSPHR  300
PLSPQCMRAD PLNLAVKPEA ERAVGHIPDM ENLQKVMQEN AEKSAKVALV MKSNAITIFD  360
GCNWRKYGQK IAKGNPCPRA YYRCTQAAGC PVRKQVQRSA DDPSVLVVTY EHMHNHPLSS  420
AAAPMAEATS SLASSYLCNV TSSNPNASAF AGVTASVDEG HASSNYAPNA NIPTITVDTI  480
NQAGSEWALR IAAARASAAL PNGGAKGETL NPQAKGAPSR AGVFSTVESV LKQQVKRAQA  540
AAPKDPAEPL NPRAKSLSGE KAQRTSSGEK KPKKKASSDS KGKAPLTLPV KAELMADAQT  600
PRFVQTLKTP RSAAASTTTT PFPPASPAVD APAGASLLTS LQTITERLQE LPGDEKPSGI  660
LEKLPTRGAK KRSRSRTVSA DTSVPVVPST TDDGARASAH GAAAFEASER GDQAVPEPPR  720
SLQLLRTSSR TSSDNLLHAL LSGAKYTPGP SPQNSCLQEQ GLSTLMGSGL SSFGLFAAAR  780
SGVKETDHDA DEVQSPRRSD GGAPDGDAAA KPQTSRVARP WPSYFQPGGS TVKGDKPTDA  840
SPEQSPLPWA SFHPFGLLSS TYNSYGTNFT PGPFTGGFGA HFSNRGNIFP FGPTPEMRDE  900
KTPGASAREE TAAAGGDVRG RPRSLSLNLG PVSPPMVSKS NGDPARTLEH QFDGDDSPLA  960
LVRRSPENNF TGLLTAVESP ANEELVRERK RARVASPGVE VGDREKVVVL DQEKRPGNAQ  1020
PGPAGTVGGE LPTFNLMGAA ITHGRIEVKT VENARLALEQ FLTAIRDTGL EK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	1e-18	360	418	19	76	Probable WRKY transcription factor 4
2lex_A	1e-18	360	418	19	76	Probable WRKY transcription factor 4

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	670	675	KRSRSR

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00428	DAP	Transfer from AT4G04450	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I0L3	0.0	A0A1Y1I0L3_KLENI; WRKY DNA-binding protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP14	17	875

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	4e-35	WRKY family protein