PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00219_0030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family B3
Protein Properties Length: 976aa    MW: 105857 Da    PI: 7.0021
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00219_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.84.5e-14759844183
                    EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
             B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                    f+kvlt sd++ +gr++lpk+ ae h    ++ke++  +++ed + ++W++++++  ++ks+ yv++  + +Fv + gL+ gD +v  
  kfl00219_0030 759 FEKVLTASDTSPLGRIILPKSQAELHlpkVLDKEGG-LIMVEDADRNRWQLRYRFwpNNKSRVYVFE-HTADFVASRGLRPGDYLVVC 844
                    99**************************96666555.9***************99666666668888.9***************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.97E-5279342IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.3E-6285344IPR009057Homeodomain-like
Gene3DG3DSA:2.40.330.101.3E-21754861IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.35E-19756854IPR015300DNA-binding pseudobarrel domain
CDDcd100171.35E-18757849No hitNo description
PfamPF023627.5E-11759848IPR003340B3 DNA binding domain
SMARTSM010198.0E-14759859IPR003340B3 DNA binding domain
PROSITE profilePS508639.488759859IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 976 aa     Download sequence    Send to blast
MLAEVEAALA AEARGDGFYG VNKLSVNEFG LHDPRKLSRL ESLDVFSEIL SWEAFGGSEK  60
HEERGGVNSK LGVVDSRPSG GGIESDDDDE NDDLPATEKR GGDLLGGKPN ARGIEDLHGV  120
KGGNETKLPA FSGRGQSILK SKSHGREGGD ALAKCTEDAG GDVEAASSEG AIQELLELCD  180
RAPDLKERGD GAPSTGLSQL GEMEVDQKLM TALKSNVQWS DEHGSLRRGE SGDEHSGGWF  240
ERSSRGGGNW QRPLGVRAES PRGQVGGYRR ELVEVPKPQP GGENQRLRFS PQQQKTLHDF  300
GTKVNWMGPG VESMEEAHQI CADMSMDIKQ LKKWISNHRP KELRSSSTPR PGVQPPWVIV  360
PPLANSAFPG NYSEAALRGL NSAHPAMVGH PFYPPAPFFG GPQFPQGPWV PPPYGLGGQA  420
MWPWAAPGAA LPPQANAPGG AASLLKQQQV GGGEQVPLDM ARLANVDNLR QVLGRKLKDF  480
DPGKVQKLVE ICKTYRQKQS SNTSIERHDD PSNGKKQKQQ LMSPRAVGNA LLSAPPLDLD  540
KATPQDEYRP QWGTTLLADP TPFGGRPDTL AANQAGWNMG DLAISSFRDA SMLHNEGRVK  600
AECRLPKPAL AYPNPSPHGE LPQASDQNFL GGHPWDDMSL LPFPPTPNQF LSHSAPAGSA  660
PQSWPEPGFG NRFFYNPASH SAAFGANPPL EMGLPAGGLQ RSATSGGKPP RTVRALRMRG  720
GCATPHLGKD PKELRANKAP LQWDRGPVTQ RPMRGKFLFE KVLTASDTSP LGRIILPKSQ  780
AELHLPKVLD KEGGLIMVED ADRNRWQLRY RFWPNNKSRV YVFEHTADFV ASRGLRPGDY  840
LVVCRVDEGH LILNDRRRPE TPEGDPSERR AVSEGSRSTV SSGSSCTRGT PDARSASEHA  900
ERVTLTSFRT GPQLPPLQQV GRQLSMEEVA RRAMSGDGHE MMDCVNLDHG EEPHVLELAR  960
EPQSLHSCGT LPRSGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A1e-237568682116B3 domain-containing transcription factor FUS3
6j9b_D1e-237568682116B3 domain-containing transcription factor FUS3
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I6J60.0A0A1Y1I6J6_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.14e-24B3 family protein