PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00250_0020
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family YABBY
Protein Properties Length: 226aa    MW: 25139.6 Da    PI: 6.3337
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00250_0020genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY29.52.3e-0965110116161
          YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWa 161
                     +   k +r Psayn f+ e+++  ka+nP+i     f a a +W 
  kfl00250_0020  65 EKKEKKEKRPPSAYNLFVSEQMKLRKAQNPEIPNTVHFKAVAHDWK 110
                    455667899************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF470952.09E-1060117IPR009071High mobility group box domain
PfamPF046901.2E-760110IPR006780YABBY protein
Gene3DG3DSA:1.10.30.102.9E-869141IPR009071High mobility group box domain
PROSITE profilePS501189.20171117IPR009071High mobility group box domain
CDDcd000842.92E-673117No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MSDVDTHMWR NVLLAGARGL EYTFGAIARA LSGEQPVEAS GFSLDHDVEP SQSGKSGANG  60
RKKKEKKEKK EKRPPSAYNL FVSEQMKLRK AQNPEIPNTV HFKAVAHDWK TSTKNKKNMP  120
GGSEAPAMTE DMHLEDFEEE AEGLLEGSGQ GGDDEGEAEV TGRAEETADR EAEERERAEK  180
EKKDKKKRKK ERQDENGPAH ENGATGHHRD EEEGTADKRS SKKGKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16065RKKKEK
26067RKKKEKKE
3181189KKDKKKRKK
4185189KKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I4441e-162A0A1Y1I444_KLENI; Uncharacterized protein