PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00344_0140

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Nin-like

Protein Properties

Length: 779aa MW: 82205.9 Da PI: 8.3604

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00344_0140	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.2	7.7e-24	658	707	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++s ++++++F++pi +A+k Lgv+lTvLK++CR +GI+RWPhRk+ks+ kfl00344_0140 658 RQLSRDEIARHFDMPISEASKRLGVGLTVLKKRCRDMGIHRWPHRKLKSM 707 68999*******************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.269	647	728	IPR003035	RWP-RK domain
Pfam	PF02042	9.1E-21	660	706	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence Send to blast
MQGGQVVVSN EECSAFNVLH QTSLGELDDG AVASQHSLES LFIYQHTANT ERLRSLHIHF 60 VDGALQALLQ DLLLSPGGYC LLRGPEKKFL ASQSEATLYV TLQSRTFLCQ GWRSLLDFSV 120 NLQLPPPLCP LLSPTKNPLL PALATLYPDL CFVEAVIAKA QQEGLVSIAP GMSEAASTSG 180 RNSGHPPATP ASQSFPTCRG FKVPPLDIPI TEPEAFSLRG GHAFQLSKNT WGDAPPPKRS 240 LLSGAFLPEI SRSGGGESSG WEQSILSALT QAAASCVSSP PNPSPALSLE TPSPQFEMPH 300 NTGGLFTSGL PHSTVNLPSP SQGFSIPHPP SALSLGETCP KPPKPSVARS LRNSAGIAVP 360 ASYQSEPHGQ ASRDPPALSL PPAPLSHSLF QGAAKLSLSY PPPGVSAAEQ LSAWSSRGAT 420 SSENTAMLTS GACTPQPARW PTREFASLVS KWSAATSPLE STHLERVNHN PGQIDVDPDT 480 KFATSEGYPS LERSQAFAAV NSPYDIKAAL PTSVQNLPSS GPLTWGALSQ LVNSLASPIN 540 QVSNPLATNS VRTGEPLPTL PASFPQTLPG LAIPATPTPF GLPDPIGTAF AALEQGLVRR 600 SAGDVSRGLA DGSPTSSSTS SMDELRAALS LGPSVSAGLS PGTGFGSENG SSKSERIRQL 660 SRDEIARHFD MPISEASKRL GVGLTVLKKR CRDMGIHRWP HRKLKSMNAL IQTVQQLGAK 720 DNGGPEQQIG SAIQRLEAER NSIEAAPSVK LTHETRKFRQ ACFKAKYKLR NLAAARAKP

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence Send to blast

MQGGQVVVSN EECSAFNVLH QTSLGELDDG AVASQHSLES LFIYQHTANT ERLRSLHIHF  60
VDGALQALLQ DLLLSPGGYC LLRGPEKKFL ASQSEATLYV TLQSRTFLCQ GWRSLLDFSV  120
NLQLPPPLCP LLSPTKNPLL PALATLYPDL CFVEAVIAKA QQEGLVSIAP GMSEAASTSG  180
RNSGHPPATP ASQSFPTCRG FKVPPLDIPI TEPEAFSLRG GHAFQLSKNT WGDAPPPKRS  240
LLSGAFLPEI SRSGGGESSG WEQSILSALT QAAASCVSSP PNPSPALSLE TPSPQFEMPH  300
NTGGLFTSGL PHSTVNLPSP SQGFSIPHPP SALSLGETCP KPPKPSVARS LRNSAGIAVP  360
ASYQSEPHGQ ASRDPPALSL PPAPLSHSLF QGAAKLSLSY PPPGVSAAEQ LSAWSSRGAT  420
SSENTAMLTS GACTPQPARW PTREFASLVS KWSAATSPLE STHLERVNHN PGQIDVDPDT  480
KFATSEGYPS LERSQAFAAV NSPYDIKAAL PTSVQNLPSS GPLTWGALSQ LVNSLASPIN  540
QVSNPLATNS VRTGEPLPTL PASFPQTLPG LAIPATPTPF GLPDPIGTAF AALEQGLVRR  600
SAGDVSRGLA DGSPTSSSTS SMDELRAALS LGPSVSAGLS PGTGFGSENG SSKSERIRQL  660
SRDEIARHFD MPISEASKRL GVGLTVLKKR CRDMGIHRWP HRKLKSMNAL IQTVQQLGAK  720
DNGGPEQQIG SAIQRLEAER NSIEAAPSVK LTHETRKFRQ ACFKAKYKLR NLAAARAKP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I9S6	0.0	A0A1Y1I9S6_KLENI; RWP-RK domain-containing protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP567	17	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	9e-32	RWP-RK domain-containing protein