PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00345_0120

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB_related

Protein Properties

Length: 1331aa MW: 137655 Da PI: 10.1592

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00345_0120	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	272	312	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT eE+e + +q G++ +++I +++ + +q++++++ kfl00345_0120 272 WTHEEEEAFFSSLRQCGKN-FEKIQAKVK-SKDKEQVRHYYYR 312 ***************99.****9.*********96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	8.22E-10	266	318	IPR009057	Homeodomain-like
PROSITE profile	PS51293	13.63	267	318	IPR017884	SANT domain
SMART	SM00717	1.4E-8	268	316	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	3.9E-5	269	316	IPR009057	Homeodomain-like
CDD	cd00167	1.85E-6	272	312	No hit	No description
Pfam	PF00249	1.7E-5	272	312	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1331 aa Download sequence Send to blast
MAGCFVAAAE VECGAAVASN PGGLPNIGSE AGGAGAGLDA PEESRTAQVL RGVELFVSDG 60 SIGTARVPTD ASNSIIDLQP EQIFQSREAQ AHAIPSGSLP ESAGQAKCNH LGAGSQSDEG 120 CQLSKPKPGV LPDTIPVRPC RSSARVSEKE RRELENAARE QSQTFDQDSR ESKERGRKDS 180 KSAPKTSKSA VTAPQDEAHP VAAEGRLEKQ AEEDEGKKQM AIEGVLLSGD RSDAVKQAPT 240 GKEAVGAEKE KDFVKAGSGD TAVEKTKKAA YWTHEEEEAF FSSLRQCGKN FEKIQAKVKS 300 KDKEQVRHYY YRCIKRMNKL LQPGMVLDIS NPLVVNTAML RWWQVRADVK GDITDLHRKP 360 RKHKQFQTAF EKAITADLHR KSKARKKQAA NPVQPAAGAA AAPQAEASSG PLPGSDPRSA 420 SGQPGPPASG SGSSIPEVMP SGKPDSSKAQ TGPFPNNSAA HLGTGKKNEA EAFGSKTGAQ 480 QSKLKDTGGK VARAGGKARA APAAGQALMG KKKGLPGKGI PKAKSSYQQK GDGAGRQQTA 540 GGKKAVGPKP GTKRGRADVK DKAGKSDSSA KRPKGRGKGA GEVINDVGSV SEASLASSRG 600 PGRPRKAAVE NGGGEQASKA SSLDGLAAAA AHLEKLEAGQ REMAAEKGRG PPGTGGLPAE 660 GHVVGVHAAG GDARAVRGQG NAAGKDEGQP AGKLTLQLFP FDAETEERVK KAGFVPFIEL 720 TLKSKKSLAS IAQHLVSKWN LDQPLDLQSA PPASSLAGCT LRLIPNIDRG EALSALSWGV 780 TDKSVAAAEV FALVGKPEIF RLKYRLLPPN CPLPVTAQAH SQGPPFDQAV PQQPGPGPWQ 840 GHPGLPHSPL RPPGLNAAQY ASTVSRGAWP PCGAAEQLPH RTYRTVSPHL QSASPLRGPA 900 AADAGSQRAF SWAADASVEA LGRGWEPPPP RYMPVSNSAP LGRGPGANDG AAFGDSLDQA 960 MFGGRGGGEH AGMPVGGNGW LDDVEGFSIS GFLNADGSRG PASSPFLDGH RSRSSLGLGS 1020 PPFSPPLWSP DQDDFLLRAP ASLEIPFGDS LLLRSLESSN DGFLPATREV SKSLGRQGSA 1080 RRASSSGLGR SRSSGDLVSP AKGKRATSSE TGVEDAEAEP GGCNVRPSSP QPRPSSGTAR 1140 AKGAESTAPG GQPCGEGAAQ GPSAEGSRPR RRSPSTGAGS QFQLSKAVLS EQPRTQEAAG 1200 TGAAALASKP FMALFPSLPG QLTQEELLSA QEGGPESTTP APPTSRGASP SSDGDAQVRA 1260 PDEQDQAEER APKRKARAKP RSDGRSKLQK SQAQPGKRAA DLSQANKAAA AALSSCFGKS 1320 PFARSSWQNA S

Sequence ? help Back to Top

Protein Sequence Length: 1331 aa Download sequence Send to blast

MAGCFVAAAE VECGAAVASN PGGLPNIGSE AGGAGAGLDA PEESRTAQVL RGVELFVSDG  60
SIGTARVPTD ASNSIIDLQP EQIFQSREAQ AHAIPSGSLP ESAGQAKCNH LGAGSQSDEG  120
CQLSKPKPGV LPDTIPVRPC RSSARVSEKE RRELENAARE QSQTFDQDSR ESKERGRKDS  180
KSAPKTSKSA VTAPQDEAHP VAAEGRLEKQ AEEDEGKKQM AIEGVLLSGD RSDAVKQAPT  240
GKEAVGAEKE KDFVKAGSGD TAVEKTKKAA YWTHEEEEAF FSSLRQCGKN FEKIQAKVKS  300
KDKEQVRHYY YRCIKRMNKL LQPGMVLDIS NPLVVNTAML RWWQVRADVK GDITDLHRKP  360
RKHKQFQTAF EKAITADLHR KSKARKKQAA NPVQPAAGAA AAPQAEASSG PLPGSDPRSA  420
SGQPGPPASG SGSSIPEVMP SGKPDSSKAQ TGPFPNNSAA HLGTGKKNEA EAFGSKTGAQ  480
QSKLKDTGGK VARAGGKARA APAAGQALMG KKKGLPGKGI PKAKSSYQQK GDGAGRQQTA  540
GGKKAVGPKP GTKRGRADVK DKAGKSDSSA KRPKGRGKGA GEVINDVGSV SEASLASSRG  600
PGRPRKAAVE NGGGEQASKA SSLDGLAAAA AHLEKLEAGQ REMAAEKGRG PPGTGGLPAE  660
GHVVGVHAAG GDARAVRGQG NAAGKDEGQP AGKLTLQLFP FDAETEERVK KAGFVPFIEL  720
TLKSKKSLAS IAQHLVSKWN LDQPLDLQSA PPASSLAGCT LRLIPNIDRG EALSALSWGV  780
TDKSVAAAEV FALVGKPEIF RLKYRLLPPN CPLPVTAQAH SQGPPFDQAV PQQPGPGPWQ  840
GHPGLPHSPL RPPGLNAAQY ASTVSRGAWP PCGAAEQLPH RTYRTVSPHL QSASPLRGPA  900
AADAGSQRAF SWAADASVEA LGRGWEPPPP RYMPVSNSAP LGRGPGANDG AAFGDSLDQA  960
MFGGRGGGEH AGMPVGGNGW LDDVEGFSIS GFLNADGSRG PASSPFLDGH RSRSSLGLGS  1020
PPFSPPLWSP DQDDFLLRAP ASLEIPFGDS LLLRSLESSN DGFLPATREV SKSLGRQGSA  1080
RRASSSGLGR SRSSGDLVSP AKGKRATSSE TGVEDAEAEP GGCNVRPSSP QPRPSSGTAR  1140
AKGAESTAPG GQPCGEGAAQ GPSAEGSRPR RRSPSTGAGS QFQLSKAVLS EQPRTQEAAG  1200
TGAAALASKP FMALFPSLPG QLTQEELLSA QEGGPESTTP APPTSRGASP SSDGDAQVRA  1260
PDEQDQAEER APKRKARAKP RSDGRSKLQK SQAQPGKRAA DLSQANKAAA AALSSCFGKS  1320
PFARSSWQNA S

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IEY6	0.0	A0A1Y1IEY6_KLENI; Myb/SANT domain protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP2164	10	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	4e-35	TSL-kinase interacting protein 1