PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00393_0080
Common NameKFL_003930070
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family B3
Protein Properties Length: 404aa    MW: 41422.7 Da    PI: 10.9083
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00393_0080genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.41.7e-104712297
                   H.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
             B3 22 faeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                   f++++g+++ +  +  l d  gr W  k+    +s++  l++GW++F+ +++L++gD +vF l+    f   v++f
  kfl00393_0080  4 FFRQNGLEPFR--MTALADDGGRLWHAKI----NSQAAALSGGWRGFALDHRLEVGDALVFALVLPYVF--AVRIF 71
                   77778777544..56788999********....888899**********************98754444..55555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.689174IPR003340B3 DNA binding domain
CDDcd100171.85E-12272No hitNo description
Gene3DG3DSA:2.40.330.109.1E-11374IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-11374IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.0072474IPR003340B3 DNA binding domain
PfamPF023626.2E-8471IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MTDFFRQNGL EPFRMTALAD DGGRLWHAKI NSQAAALSGG WRGFALDHRL EVGDALVFAL  60
VLPYVFAVRI FKASRGGKED DCVAAGGASE GQPVRGEERI LSGDQKKRLA TIRGLPGGLP  120
SRNQKPPRSA PTLPSPQNGN KRPTSKPAQG SSLARADVAP KDKGGALEKA FSGGTKTTKS  180
ALSGGSNGAP PSAARKPAVN RTWPVIPRTA TAVKRAVGLG PSGPQTSEHA GPSRKSDEPC  240
KVEASGKVVV FGSAEASGMA ETSGKAEVSG GSGPSDKRER SEKAGVSGIL GPSRKAETLE  300
RTRASGNSVL SGEAETSGKA GVIGNGGATE PFGLSAELGA SAFPKAGTSD RGGSAKPEAN  360
ASALVSTVVQ IKHSKVAVAF RVDRKKKGGL KSNAELMAER LNML
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HKF60.0A0A0U9HKF6_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-10B3 family protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]