PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00393_0120
Common NameKFL_003930120
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family B3
Protein Properties Length: 1288aa    MW: 138597 Da    PI: 8.7887
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00393_0120genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-10451554198
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS...-EEEEEE.........EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg...rsWevkliy.......rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                    f  v++ps v++ ++l lp + a+++++   ++  +t+++e       W ++            ++g+  +++GWk+F++++gL  gD+v+F+  +
  kfl00393_0120 451 FMRVMLPSFVTSGCWLGLPATVADQFMKR--GEYSVTFRSEGTahtVNWLFRPPEkkakrtaPSSKGKPGFSGGWKGFAEDHGLVPGDSVLFE--K 542
                    778999*****************999754..66678888866666677777773322333323333337888*********************..4 PP

                    SSEE..EEEEE- CS
             B3  87 rsefelvvkvfr 98 
                    +++ ++ +++fr
  kfl00393_0120 543 NHKYKFSLHLFR 554
                    455555777776 PP
2B331.23.9e-1011141191183
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
             B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83  
                     f+  +++s+v +  +  lp  f+++ +++     ++ l++ +g +We +l +++++    l++GW++F+ +++L+ gD v++ 
  kfl00393_0120 1114 FVLDMKTSHVDRVFWRGLPPAFLDALDLPRD--CKVYLQNARGFVWEATLLIEQQK---GLSGGWRKFAVDHQLEFGDHVILD 1191
                     5666899999999**********99999955..58***************665554...39******************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100171.54E-16450554No hitNo description
SuperFamilySSF1019366.87E-15450555IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.3E-13450556IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.124451556IPR003340B3 DNA binding domain
PfamPF023629.7E-8451555IPR003340B3 DNA binding domain
SMARTSM010195.8E-5451556IPR003340B3 DNA binding domain
SMARTSM010192.3E-5757848IPR003340B3 DNA binding domain
SuperFamilySSF1019369.42E-13758848IPR015300DNA-binding pseudobarrel domain
CDDcd100177.00E-15760846No hitNo description
Gene3DG3DSA:2.40.330.107.0E-10784848IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.588790848IPR003340B3 DNA binding domain
SuperFamilySSF1019361.53E-1211121191IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.29211141213IPR003340B3 DNA binding domain
PfamPF023621.8E-711141191IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-911141194IPR015300DNA-binding pseudobarrel domain
CDDcd100177.53E-1211141190No hitNo description
SMARTSM010195.9E-611141217IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1288 aa     Download sequence    Send to blast
MDALRSRPSL LVVKHEPLDA PLNTPQEPPL ITPAKLVTVP PLCGPDTPVQ STPPPKLDQL  60
AEQVRRTSEM LARLQNMVQG VHEGREEFTA AEATQPLGKD STLSSESVAP PLGACSDPRA  120
GGAGFAVGSR KRLFGERGGE VERGANSNAE GQGVVEKVVC EKRVPGIVEA AEVLLGAPDG  180
QSLVLDITPV PEMAGQEESR GGEGAAENVG FELLPGTEAS ASPTPEANQM QELGSLLAEG  240
SLFGTERVPV ARTPSPYAQS GGPAEGPTPP PKADEVAPQN PRTLFNGVCV KTEWVDEPLG  300
LETRGSAVNG HPGSSGNSGM NEQLAVNGHT GLYAGRSGVN GHSKVDDFPP SEPIDDDSGS  360
GLEDNDHGFD SEPEEAAAEE PSFGEPVEGP RFFAESEEEK SESERETGDI GGWLKAGWQE  420
QESKTGSARD AITPAEKQEW LSYEGRFQTC FMRVMLPSFV TSGCWLGLPA TVADQFMKRG  480
EYSVTFRSEG TAHTVNWLFR PPEKKAKRTA PSSKGKPGFS GGWKGFAEDH GLVPGDSVLF  540
EKNHKYKFSL HLFRRCEYGG SVKRAAEAAN RKGAELDATA AGGSDGGQVG GVMEMEETRA  600
GFVSDLKLNG GERRHSETDG HHTRQKKLTE DFPVVKRQPR IIRKGTGKKR RGKGDGGNLR  660
GEETKAVDGA DVTADGAGGS SGEPGGPKRV KRRRDGPGRV LTSAGRIMTS RAPGGAGSEH  720
FVTNKDTVHY RYEEASENGQ RRAKKAMEEC LTAYPNVKMV MSKSHVDKGF WLGGFTYLSC  780
ETHLQTDQPV ALVDSRGGVW HALLLHDASG LSGGWRGFSI DHRLEVGDAL VFEMVFPYVF  840
HVRIFKASRG GKEEDCTGAT GTRERRIRAA GRVQVGEKRK VNEAQLKVLA ALLNLPDGLP  900
PERDYSQGIP LPELGPAPPR KVAKLSDLAP NAKAPNSSTK ARADESGPNL ASTFGNGRPR  960
IQPVRGGPVV KLEKVERTPL EETQGVERDL VGGEEIRVGE GPGAKRRRGS ETEVSLASPA  1020
PKQLKKTAKA KTSKAKTGAG TPPRSLGAAP GKTKKGELHF EKNPKNRDPE SGRRRHLEEV  1080
TGRVYVEPSK EQIAAAAAAA QKAAKRIPAE RLPFVLDMKT SHVDRVFWRG LPPAFLDALD  1140
LPRDCKVYLQ NARGFVWEAT LLIEQQKGLS GGWRKFAVDH QLEFGDHVIL DVREKVAVPN  1200
GSDAVGVTIL VRIFRAKWDG REDDCRAFAF VPVEGKVVGK TTAYEGKREN GVKREPGVKK  1260
VKKVKKELRV TSKGGVKKES GVKKEKRG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1647652KKRRGK
2686692PKRVKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HN270.0A0A0U9HN27_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-18B3 family protein
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]