PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00424_0060
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family B3
Protein Properties Length: 528aa    MW: 58073.1 Da    PI: 5.7404
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00424_0060genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-102383001886
                    --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
             B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                    l + f+++h ++ e  + + le + g +We  +  +  +g+  l++GW+ F+ ++gL++gD   F++++
  kfl00424_0060 238 LDRAFCDAHLSPDE--RAVLLEGPAGGEWEAVY--KPVRGA--LSGGWRAFAIDHGLDDGDAAKFEVVD 300
                    6789**99965544..47***************..776666..9*********************9764 PP
2B351.51.8e-163033771896
                    --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
             B3  18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                    l  +f+++h  g+  ++  l+lede+g+sWev +  + ++    l++GW +F+k+++L +gD +vF++++   e++ +vkv
  kfl00424_0060 303 LQAHFCQHHlPGD--RDGLLILEDEHGESWEVMY--KPSR--AGLSGGWGGFAKDHDLGDGDCCVFEVIEPrGEEKWRVKV 377
                    5678998887444..4458***************..6665..55***********************88654665555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.4E-9149236IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.67E-12150235IPR015300DNA-binding pseudobarrel domain
CDDcd100177.48E-11154232No hitNo description
PROSITE profilePS508637.387156237IPR003340B3 DNA binding domain
SMARTSM010190.022156246IPR003340B3 DNA binding domain
PROSITE profilePS508638.98238313IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.3E-9238302IPR015300DNA-binding pseudobarrel domain
PfamPF023622.1E-7240300IPR003340B3 DNA binding domain
SuperFamilySSF1019363.92E-9240302IPR015300DNA-binding pseudobarrel domain
CDDcd100171.11E-9240308No hitNo description
SMARTSM010197.3E-9296383IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-15303383IPR015300DNA-binding pseudobarrel domain
PfamPF023622.3E-14305377IPR003340B3 DNA binding domain
SuperFamilySSF1019361.39E-15305381IPR015300DNA-binding pseudobarrel domain
CDDcd100172.26E-18306381No hitNo description
PROSITE profilePS5086311.66320383IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
METRILLLLR IHRGPLHFYI KAPASSMAKL SKIELERQER IKENERHLQD FGIVDAADAL  60
AASRAKPQAP RRRSSLGAHG VDGIVEIRRS GRVQNMPAVS YKDLEERNDH LRLTRGPGRR  120
SAGPYRPRSG TSTCSDEARD EAEARANAIK VEGPAFVKRL LQSMISGGFW LQWPNDWCVV  180
HMPSHDVWVT LLDADGEAWE CKYLGGKKGL SAGWRGYSIH KGFDDGDALA FEVLDKNLDR  240
AFCDAHLSPD ERAVLLEGPA GGEWEAVYKP VRGALSGGWR AFAIDHGLDD GDAAKFEVVD  300
KHLQAHFCQH HLPGDRDGLL ILEDEHGESW EVMYKPSRAG LSGGWGGFAK DHDLGDGDCC  360
VFEVIEPRGE EKWRVKVHIV RADRDGTAAL EGEEGEGDEV QIDDGEEEVI PVSADSDQGG  420
AALVKEPSID SPPKKRKREP KVSMSETVKA QPAAKKGKSK RAIGKAQDNG LTQCAVDFVR  480
GRRVSPEGVV SFLLKVKGVP KPVWVEDGQV SGDSAHCWLS GEEEEEDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IBQ00.0A0A1Y1IBQ0_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9951658
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-21B3 family protein