PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00451_0030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family DBB
Protein Properties Length: 226aa    MW: 24199.2 Da    PI: 6.4966
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00451_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box201.4e-06434536
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg 36
                    C+ +e  ++ lfC  ++  lC+ C ++ H g
  kfl00451_0030  4 LCDVCEAAPALLFCAADEAALCRPCDEKVH-G 34
                   6***************************99.5 PP
2zf-B_box292.2e-095493438
       zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.....Ht 38
                   + C+ +e+ ++ ++Ce +++ lC +C +  H++     H+
  kfl00451_0030 54 PSCDVCEKAPAYFYCEIDGTSLCLQCDMDVHSSagkklHE 93
                   78*****************************777777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.253147IPR000315B-box-type zinc finger
SMARTSM003362.3E-9147IPR000315B-box-type zinc finger
CDDcd000213.48E-7445No hitNo description
PROSITE profilePS501199.0155197IPR000315B-box-type zinc finger
SMARTSM003363.0E-105197IPR000315B-box-type zinc finger
CDDcd000215.24E-85497No hitNo description
PfamPF006436.1E-75493IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MRALCDVCEA APALLFCAAD EAALCRPCDE KVHGCNKLAS RHVRLELAEA RAVPSCDVCE  60
KAPAYFYCEI DGTSLCLQCD MDVHSSAGKK LHERFLLMGQ RVEIPMAPGK PEGGDKVPVL  120
QEQRLHQNGN AHPSHRHGKP DEEMREARVA DSSGTAMATA IGGEPSGDAD TSKQSLLDLN  180
RCPPPRSKGE HSKQAAVSSG GHRNGPAAQA GQSRPPMNDQ DRNEVG
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024517934.13e-62B-box zinc finger protein 18 isoform X3
RefseqXP_024540627.13e-62B-box zinc finger protein 18 isoform X3
SwissprotC0SVM54e-55BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A1Y1IIZ41e-164A0A1Y1IIZ4_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP33521628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-57DBB family protein