PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00644_0020

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

CPP

Protein Properties

Length: 1842aa MW: 190663 Da PI: 8.3024

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00644_0020	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.4	7e-14	1225	1262	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+Ckks+Clk+YCeCfaa+++C+ C C dC+N+ kfl00644_0020 1225 TCKRCHCKKSRCLKLYCECFAANVYCTG-CDCLDCQNRP 1262 589***********************.******86 PP
2	TCR	50.4	4.3e-16	1305	1343	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k+kkgC+Ckks C+kkYCeCf+ag+ C++ C+Ce+C N+ kfl00644_0020 1305 KHKKGCHCKKSMCQKKYCECFQAGVACTDACRCENCANE 1343 689***********************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	7.9E-16	1224	1264	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	31.61	1225	1345	IPR005172	CRC domain
Pfam	PF03638	3.2E-10	1227	1261	IPR005172	CRC domain
SMART	SM01114	6.7E-16	1305	1346	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	2.5E-11	1307	1343	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 1842 aa Download sequence Send to blast
MDSPERRAPI KPNWDGIMSS PGSAAFMDLC DTLSPIRPVP TFHASTFNEL NQIRSPASPN 60 FPTRRLKEKR FANSSAAALL LAATTDEAPK TPGLLKREPL RQTFGRNLSR IGDPSTALFA 120 GQSEEAPASA AASKQVLVVQ EGGSVGDCES KLALKGATED PVVAGARSLP AQQGQPNTRC 180 PPPKTEHMEE ATKPAEAKGE DLGAKPESSR TADDGQKASG SKRGRDEPQP DADNLAPQAA 240 APPAFLKSLK ADSDLPATVV VQPPESKRGK ASASDQDAKT VLAVPTPNPY NPCSTVIPGS 300 QQAKESVMPP IASPVPPTKL TEAAAGPLDQ EAEEKKAEGG ATRSGAEQPS LGTQLHRELS 360 FAVKQSGQVA SASERALQAQ EVASESKSQA ILPAPAAMEL TPPTPKLAAA VQDNPEVRPR 420 QTRSRTMEKG EGSGSKQRAG GTGIVLGVLP KGKRSLSNRK KSRFVSGGED SSAAEDAGGS 480 SDDTERTVSA DGAVADEGAQ RLQTSVCGAV AGAGIFGEDE AGSSPSKVDG GAGIESQQGA 540 AETALADTES VKEAGKALGS REDLDGPAKE TGLVRQSAVA VLEPCQKAAE PESARHASPP 600 RSTVLPQLKG VRSPRKGVRR GQETPPKAPA NAAPPPGGAK QTEEDVAQLL VDLSEGRTPE 660 KAKRRLIGEE ATPTSGLGQK RIAVESAPAA AEKLEGGVAG SGRTTPIQVA TAVKVEAISA 720 SVHVVSGPAV SCEPAATPRS VVFQDAKNGT SSSGVFPANQ IYFERPGALG GNTGRARRLD 780 FDADAARRQS LTARQDPRLS LEAQGSWPGF SAVQNSPAQS QMYISVANAS STPGPRNGTP 840 QSGQNPPETV KMVVKQEGGD NAWQPGQKRG ATPEGEGERA AKRERVSFSD GVYQDAKDAS 900 DATAAALSAA MGALSACNTP ATCQPTVGRP NPTPVQARPA QAPPVVARPS GGPVWKAGGN 960 ERSNLAVTPV AMHNAQPSSW PVATPPGAPS AFQHGNPSVT PGQAKQGYVT PPPRCAQPVV 1020 RPQGLASPLV TSAPGVTSAA APFNPNVAIV PKPLPLPAPV RAAKPLNLAR LGAGLSAGTV 1080 VRVTPGVGPV PPEHHTHLPG PQSAMPGPTG PPGKRASFPP TQRPQAFTST RFPGYSHYTP 1140 SYQKALPRPA PQGYGAVSMP FGQAQGPPPG MSPAVVQRQK MEAAIERKPA QPDPLSELQL 1200 DLDLEMDLVV VHESPPQQPK KPAGTCKRCH CKKSRCLKLY CECFAANVYC TGCDCLDCQN 1260 RPEFEDIVMA KKEEIERKDP HAFAPKIVEG ESPSPTKGET PASGKHKKGC HCKKSMCQKK 1320 YCECFQAGVA CTDACRCENC ANEFGTKDSH SHGPHCDHAG GGAVEAAGMR SPATPGFGHI 1380 SIQRTFPGGG KMVAKKQSLD PHGDEISALD FPHHHPTKEK RPETPPKPEP ATSAAPGTSV 1440 APATSAGAAT SAKGRGRKKD AAKGDLKTVR ENRGGAAEQT SSGVFPSISS SPARWSLASP 1500 DPSPVSRSYP IPPSPPDRRG SDTTEFLHLP ASPSPSFGSG PLLRTGTGVG GTPLSRAKVR 1560 STPLGAVIWN PADMASDPAD RRNSGQGVYS PQRTPGVSSS GGMLKLSNLS GTPTPNAVPN 1620 SALEKGGASG LQEGGGFDTG YTNPSALTCD ESVDMDGQDP LAESFFMEPC DYGVEGDLYT 1680 YDPGQMDLPA YGEDVYGEAP KESVPVSPPP KTQRTGPSFV SLKNLSVGSG RQYNEDPDDP 1740 SAALLSPQDG KRRRLSAGGR VSGEAFVSAD EATPIRISKT GSPTKVMAPA FDWGGSPGLG 1800 RMATPGKKSL NLSMLPSLPI LPARLSGGEG SGLVAPENVS QE

Sequence ? help Back to Top

Protein Sequence Length: 1842 aa Download sequence Send to blast

MDSPERRAPI KPNWDGIMSS PGSAAFMDLC DTLSPIRPVP TFHASTFNEL NQIRSPASPN  60
FPTRRLKEKR FANSSAAALL LAATTDEAPK TPGLLKREPL RQTFGRNLSR IGDPSTALFA  120
GQSEEAPASA AASKQVLVVQ EGGSVGDCES KLALKGATED PVVAGARSLP AQQGQPNTRC  180
PPPKTEHMEE ATKPAEAKGE DLGAKPESSR TADDGQKASG SKRGRDEPQP DADNLAPQAA  240
APPAFLKSLK ADSDLPATVV VQPPESKRGK ASASDQDAKT VLAVPTPNPY NPCSTVIPGS  300
QQAKESVMPP IASPVPPTKL TEAAAGPLDQ EAEEKKAEGG ATRSGAEQPS LGTQLHRELS  360
FAVKQSGQVA SASERALQAQ EVASESKSQA ILPAPAAMEL TPPTPKLAAA VQDNPEVRPR  420
QTRSRTMEKG EGSGSKQRAG GTGIVLGVLP KGKRSLSNRK KSRFVSGGED SSAAEDAGGS  480
SDDTERTVSA DGAVADEGAQ RLQTSVCGAV AGAGIFGEDE AGSSPSKVDG GAGIESQQGA  540
AETALADTES VKEAGKALGS REDLDGPAKE TGLVRQSAVA VLEPCQKAAE PESARHASPP  600
RSTVLPQLKG VRSPRKGVRR GQETPPKAPA NAAPPPGGAK QTEEDVAQLL VDLSEGRTPE  660
KAKRRLIGEE ATPTSGLGQK RIAVESAPAA AEKLEGGVAG SGRTTPIQVA TAVKVEAISA  720
SVHVVSGPAV SCEPAATPRS VVFQDAKNGT SSSGVFPANQ IYFERPGALG GNTGRARRLD  780
FDADAARRQS LTARQDPRLS LEAQGSWPGF SAVQNSPAQS QMYISVANAS STPGPRNGTP  840
QSGQNPPETV KMVVKQEGGD NAWQPGQKRG ATPEGEGERA AKRERVSFSD GVYQDAKDAS  900
DATAAALSAA MGALSACNTP ATCQPTVGRP NPTPVQARPA QAPPVVARPS GGPVWKAGGN  960
ERSNLAVTPV AMHNAQPSSW PVATPPGAPS AFQHGNPSVT PGQAKQGYVT PPPRCAQPVV  1020
RPQGLASPLV TSAPGVTSAA APFNPNVAIV PKPLPLPAPV RAAKPLNLAR LGAGLSAGTV  1080
VRVTPGVGPV PPEHHTHLPG PQSAMPGPTG PPGKRASFPP TQRPQAFTST RFPGYSHYTP  1140
SYQKALPRPA PQGYGAVSMP FGQAQGPPPG MSPAVVQRQK MEAAIERKPA QPDPLSELQL  1200
DLDLEMDLVV VHESPPQQPK KPAGTCKRCH CKKSRCLKLY CECFAANVYC TGCDCLDCQN  1260
RPEFEDIVMA KKEEIERKDP HAFAPKIVEG ESPSPTKGET PASGKHKKGC HCKKSMCQKK  1320
YCECFQAGVA CTDACRCENC ANEFGTKDSH SHGPHCDHAG GGAVEAAGMR SPATPGFGHI  1380
SIQRTFPGGG KMVAKKQSLD PHGDEISALD FPHHHPTKEK RPETPPKPEP ATSAAPGTSV  1440
APATSAGAAT SAKGRGRKKD AAKGDLKTVR ENRGGAAEQT SSGVFPSISS SPARWSLASP  1500
DPSPVSRSYP IPPSPPDRRG SDTTEFLHLP ASPSPSFGSG PLLRTGTGVG GTPLSRAKVR  1560
STPLGAVIWN PADMASDPAD RRNSGQGVYS PQRTPGVSSS GGMLKLSNLS GTPTPNAVPN  1620
SALEKGGASG LQEGGGFDTG YTNPSALTCD ESVDMDGQDP LAESFFMEPC DYGVEGDLYT  1680
YDPGQMDLPA YGEDVYGEAP KESVPVSPPP KTQRTGPSFV SLKNLSVGSG RQYNEDPDDP  1740
SAALLSPQDG KRRRLSAGGR VSGEAFVSAD EATPIRISKT GSPTKVMAPA FDWGGSPGLG  1800
RMATPGKKSL NLSMLPSLPI LPARLSGGEG SGLVAPENVS QE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	1e-19	1218	1342	9	120	Protein lin-54 homolog
5fd3_B	1e-19	1218	1342	9	120	Protein lin-54 homolog

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1750	1754	KRRRL

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00624	PBM	Transfer from PK22848.1	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IHW6	0.0	A0A1Y1IHW6_KLENI; Tesmin/TSO1-like CXC domain containing protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP993	17	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-37	TESMIN/TSO1-like CXC 2