PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00734_0080
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 515aa    MW: 59487.7 Da    PI: 6.8127
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00734_0080genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.43e-06357381123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    ++C+  dCg++F ++ nL+ H + H
  kfl00734_0080 357 HSCTypDCGRTFATPGNLRDHENEH 381
                    689999***************9998 PP
2zf-C2H215.64.7e-05387411123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    y+Cp   Cg+ Fs+k  + rH ++H
  kfl00734_0080 387 YQCPfeGCGMAFSSKTVMCRHVKKH 411
                    9***********************9 PP
3zf-C2H215.26.2e-05415439123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    + Cp   Cgk+F  ++ L +H++ H
  kfl00734_0080 415 HICPyeGCGKRFAFRERLITHQKIH 439
                    689********************99 PP
4zf-C2H216.91.8e-05447469323
                    ET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   3 Cp..dCgksFsrksnLkrHirtH 23 
                    Cp   C+k+F+   +L+ H+rtH
  kfl00734_0080 447 CPweGCDKTFKWANSLHGHMRTH 469
                    9999******************9 PP
5zf-C2H217.31.4e-05475499123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    ++C+  +Cg+ F  k +L+rH rtH
  kfl00734_0080 475 FQCTwpNCGRQFGYKVDLTRHERTH 499
                    899999******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.607.4E-8354381IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015713.318357386IPR007087Zinc finger, C2H2
SMARTSM003550.0019357381IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280359381IPR007087Zinc finger, C2H2
SuperFamilySSF576671.5E-10367426No hitNo description
Gene3DG3DSA:3.30.160.604.0E-9382412IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS501579.91387416IPR007087Zinc finger, C2H2
SMARTSM003558.5E-5387411IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280389411IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.5E-9413443IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015714.066415444IPR007087Zinc finger, C2H2
SMARTSM003550.0018415439IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280417439IPR007087Zinc finger, C2H2
SuperFamilySSF576672.84E-16426478No hitNo description
Gene3DG3DSA:3.30.160.605.1E-14444468IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015714.274445474IPR007087Zinc finger, C2H2
SMARTSM003559.8E-5445469IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280447469IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.5E-16469501IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576672.23E-9469502No hitNo description
PROSITE profilePS5015713.277475504IPR007087Zinc finger, C2H2
SMARTSM003556.5E-4475499IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280477499IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MMADRERYMQ GEPEPDERHG AFHVQGEGQH GGSHEHYQAS DQEGRGWSER VDQEEDDRSR  60
HEELDMEVEL RGEEVPVHEE DEEEGEDARR HQQATHMGLA GHQGYLQVPM QYRRDGALEE  120
EEQQRLEEQQ RGQLLQYTAL GGTILDSHSL NLALAQQQLA HQQLAQQQLA QQQLAQQQLA  180
QQQLVHQHLA HQQMAVAGPG MQHGEAIPLM GMGKQSKKRR KLKRLEIDLD PISYQKLMKL  240
VNDQFEGSVE RFLSASLAHV ELPEKPGKKD PYSASRKPAL TKWKRLRFEH LRGGDSHELS  300
LAHRSLLETL EASGQQHYPL DITPQLRDIP WEDLTIPQLE KMLDEVKRML IMTEKVHSCT  360
YPDCGRTFAT PGNLRDHENE HRGHRPYQCP FEGCGMAFSS KTVMCRHVKK HERAHICPYE  420
GCGKRFAFRE RLITHQKIHS DERPLHCPWE GCDKTFKWAN SLHGHMRTHT GEKPFQCTWP  480
NCGRQFGYKV DLTRHERTHY GQPARRAVEV PHGGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6a57_A3e-3238749723128Lysine-specific demethylase REF6
6a58_A3e-3238749723128Lysine-specific demethylase REF6
6a59_A3e-3238749723128Lysine-specific demethylase REF6
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216220KKRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002983078.21e-105zinc finger protein 26
TrEMBLA0A1Y1ISJ70.0A0A1Y1ISJ7_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1524234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48430.13e-32relative of early flowering 6