PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00822_0050

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Protein Properties

Length: 1353aa MW: 143482 Da PI: 6.7187

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00822_0050	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.6	7.9e-12	922	1008	1	86
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++ +gr vlpk ae++ ++++ ++ + +ed++g +W k+++ ++ks++yvl+ + + vk +L gD++ F + kfl00822_0050 922 FEKALTASDTSHLGRWVLPKLAAERYmpYMEHRDGTFMLVEDSKGGRWCCKYRWwpNNKSKMYVLE-QTGDIVKHFKLHPGDTIHFC--Q 1008 99***********************94455677789999*********8889999999.89***************997..3 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.4E-6	460	514	IPR009057	Homeodomain-like
Gene3D	G3DSA:2.40.330.10	4.2E-19	920	1025	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	5.76E-15	921	1016	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	5.98E-12	921	1006	No hit	No description
SMART	SM01019	0.0012	922	1022	IPR003340	B3 DNA binding domain
Pfam	PF02362	5.6E-9	922	1012	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1353 aa Download sequence Send to blast
MLASLHGSPQ QSQGWDAFHP GTLNLSFPYG HIEPLKQWQP KAYAKRLEDV KPDKKKGASR 60 MQVKREAQKA MLARCKSNNS AGQSFAMLPP PYAPLGFVGS STGDGAQCDS LKRKYDQALP 120 ALDEQLSSKR SLVESAWPVE LAGFAAGQSV WRLRGGGQAA QDEASEDPPA EGGTQNQAEA 180 EGSQQAGQRV DALISEVASM MESAQRGGQA SEVMLRLNRL ESIPSLPRFN SLELADEMFA 240 DILKWDLPKG EERTVEVKEG EVGRTRGGGV ESDDAQVEEF LKSLDPALAN REPVAIQDQL 300 QKSAAEGKDG AEGKQRAGAR PVSVRGGAKD LGDAGENKSE GTASEQASQD QAAAGEGLKH 360 SGSGEAAQPS KLQSAEAVPG KQSGGKPEVQ PKQGPAISQK PMVRSPRAGE EKPRQLVRPS 420 LDILAQASAS FGPTSPVASK DSLESPESPI LSSLGGGPRR PKLTPPQQEK LRGFAAKVHW 480 NWGAAEGTGE ARQLCAELGI DMRQMKRWVE SHRPKDVAPP PPQAVPFMGW GVPPGVGMMN 540 PAYMSYMAGS PMAFPGAWPG MPRPPLGDGS WGGGPPMGPM GQPFNPTMQA PFTQPLLGPS 600 FPGPPFLPGG FASTGFGGGA PGGPLSAPAA TPLNVDENQE LVASAEALGK LLGDRVNTIP 660 PEKLKEILAA WMAHKRNKRE QETVPAAREA PLSGAGGTKR KEPEPLAHPP ADEPSEGSLL 720 QFSIPSLERG LSNAPSISTL LAEELASAAA EDGGLGKDGD GAPGGAFKGQ GASRDPSLSV 780 LLQEIGGAME EAPKRTMGPL ERQVFGVDED NMQMGPAPES GDDESASSSD EPSERRPGLR 840 PRSKRRRFAE SSAEEEEEEP EEPQSEENEE PGVDEEVFPH DPEGRAEGGQ WQLGTGLEDR 900 RLPPPLGYQG HVGQTGIRAV LFEKALTASD TSHLGRWVLP KLAAERYMPY MEHRDGTFML 960 VEDSKGGRWC CKYRWWPNNK SKMYVLEQTG DIVKHFKLHP GDTIHFCQSV EGHLMIYEQK 1020 KNSKQRPPVA SAASPAPLPK RYAKRVPIEP KPSPKGSRKQ LKAPKAPRSP PPPKAAYKLP 1080 SPFARVSTRG RTIRPSSRLR RGGDGNPENG SPALVYNASA GQGLAGRLVS HEWRGSAMLS 1140 PGGSGNAASD TPEVGVDPWG ADELLGRGEG TAQINELARH FLQQTNPGGA GRGGLSAGVP 1200 RPLARTGSAD LANEILALTN SGREVGPREL SPLGAPSRQG SLTPVLQRTK SSESLPFSVS 1260 NFPPIPTGLE SLSRSSSLNR TASLARAGSL LSRLPSDLEA LSKMDNFPSF DFAATPPLPV 1320 ESAFQPYGGT PGRQANAAVA TAGDAAQNRR RAG

Sequence ? help Back to Top

Protein Sequence Length: 1353 aa Download sequence Send to blast

MLASLHGSPQ QSQGWDAFHP GTLNLSFPYG HIEPLKQWQP KAYAKRLEDV KPDKKKGASR  60
MQVKREAQKA MLARCKSNNS AGQSFAMLPP PYAPLGFVGS STGDGAQCDS LKRKYDQALP  120
ALDEQLSSKR SLVESAWPVE LAGFAAGQSV WRLRGGGQAA QDEASEDPPA EGGTQNQAEA  180
EGSQQAGQRV DALISEVASM MESAQRGGQA SEVMLRLNRL ESIPSLPRFN SLELADEMFA  240
DILKWDLPKG EERTVEVKEG EVGRTRGGGV ESDDAQVEEF LKSLDPALAN REPVAIQDQL  300
QKSAAEGKDG AEGKQRAGAR PVSVRGGAKD LGDAGENKSE GTASEQASQD QAAAGEGLKH  360
SGSGEAAQPS KLQSAEAVPG KQSGGKPEVQ PKQGPAISQK PMVRSPRAGE EKPRQLVRPS  420
LDILAQASAS FGPTSPVASK DSLESPESPI LSSLGGGPRR PKLTPPQQEK LRGFAAKVHW  480
NWGAAEGTGE ARQLCAELGI DMRQMKRWVE SHRPKDVAPP PPQAVPFMGW GVPPGVGMMN  540
PAYMSYMAGS PMAFPGAWPG MPRPPLGDGS WGGGPPMGPM GQPFNPTMQA PFTQPLLGPS  600
FPGPPFLPGG FASTGFGGGA PGGPLSAPAA TPLNVDENQE LVASAEALGK LLGDRVNTIP  660
PEKLKEILAA WMAHKRNKRE QETVPAAREA PLSGAGGTKR KEPEPLAHPP ADEPSEGSLL  720
QFSIPSLERG LSNAPSISTL LAEELASAAA EDGGLGKDGD GAPGGAFKGQ GASRDPSLSV  780
LLQEIGGAME EAPKRTMGPL ERQVFGVDED NMQMGPAPES GDDESASSSD EPSERRPGLR  840
PRSKRRRFAE SSAEEEEEEP EEPQSEENEE PGVDEEVFPH DPEGRAEGGQ WQLGTGLEDR  900
RLPPPLGYQG HVGQTGIRAV LFEKALTASD TSHLGRWVLP KLAAERYMPY MEHRDGTFML  960
VEDSKGGRWC CKYRWWPNNK SKMYVLEQTG DIVKHFKLHP GDTIHFCQSV EGHLMIYEQK  1020
KNSKQRPPVA SAASPAPLPK RYAKRVPIEP KPSPKGSRKQ LKAPKAPRSP PPPKAAYKLP  1080
SPFARVSTRG RTIRPSSRLR RGGDGNPENG SPALVYNASA GQGLAGRLVS HEWRGSAMLS  1140
PGGSGNAASD TPEVGVDPWG ADELLGRGEG TAQINELARH FLQQTNPGGA GRGGLSAGVP  1200
RPLARTGSAD LANEILALTN SGREVGPREL SPLGAPSRQG SLTPVLQRTK SSESLPFSVS  1260
NFPPIPTGLE SLSRSSSLNR TASLARAGSL LSRLPSDLEA LSKMDNFPSF DFAATPPLPV  1320
ESAFQPYGGT PGRQANAAVA TAGDAAQNRR RAG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j9b_A	5e-20	921	1025	4	109	B3 domain-containing transcription factor FUS3
6j9b_D	5e-20	921	1025	4	109	B3 domain-containing transcription factor FUS3

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1ILG2	0.0	A0A1Y1ILG2_KLENI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	1e-19	B3 family protein