PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00836_0100
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 191aa    MW: 21391.2 Da    PI: 10.3607
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00836_0100genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.8e-062347123
                   EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCp..dCgksFsrksnLkrHirtH 23
                   ++C    C++sF+ k +L  H+r+H
  kfl00836_0100 23 FVCDspGCSRSFTAKRYLSIHQRSH 47
                   899999******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.24E-52049No hitNo description
Gene3DG3DSA:3.30.160.601.4E-72147IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.4892352IPR007087Zinc finger, C2H2
PROSITE patternPS0002802547IPR007087Zinc finger, C2H2
SuperFamilySSF540603.71E-1058162No hitNo description
CDDcd000850.0021117162No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MAAVTSTVGD KRKHSLVDSQ EEFVCDSPGC SRSFTAKRYL SIHQRSHSKT NAPLASLEGW  60
KQHFKYKHIF RIPDGRVWNT QLGSFQKGTR SDGYTALRIE GKVVKRHRLN FEIATGRAIK  120
PGMEIDHIVA SPRPTDGSDP PPQDDKWTNL QELTRAEHRR KTLVDNPGIH KKADSPGVHQ  180
GAEGLHISLV P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IM543e-64A0A1Y1IM54_KLENI; Putative endonucleases
TrEMBLA0A1Y1IQK25e-63A0A1Y1IQK2_KLENI; HNH nuclease