PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl01106_0010
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family ZF-HD
Protein Properties Length: 205aa    MW: 22248.5 Da    PI: 9.9312
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl01106_0010genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer66.45.3e-213891456
    ZF-HD_dimer  4 vrYkeClkNhAaslGg.havDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                    ++  C kNhA + G+ +avDGC Ef+p + + + ++ l CaACgCHRnFH ++
  kfl01106_0010 38 PHWGACNKNHALRSGApYAVDGCTEFLPLSLDPSAPEHLVCAACGCHRNFHLKD 91
                   57889**********869**********97777******************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-84097IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152318.1934091IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047706.3E-194091IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.3E-174290IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.47E-10117188IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-17124188IPR009057Homeodomain-like
TIGRFAMsTIGR015658.1E-17127184IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MAAPVDEHLA LKVQDIPPAP PFQNLAVIPE AGMLEKRPHW GACNKNHALR SGAPYAVDGC  60
TEFLPLSLDP SAPEHLVCAA CGCHRNFHLK DGQRPILYAT IAPKAGFKKG KGAGGAGAAP  120
FDSVAGQKRK RSQFTPEQRD AMLRFAESIN WTTTKQDKSV IQQFCSQIGI DKSNFTHFLH  180
NIKKKRSKQA QPQQAAGQVP YATGP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IPU31e-151A0A1Y1IPU3_KLENI; Zinc finger-homeodomain protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9116237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-23homeobox protein 22