PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold00060-snap-gene-1.69-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 233aa    MW: 26338.5 Da    PI: 8.5236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold00060-snap-gene-1.69-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.3e-101151501348
                                                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                                     bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                                                NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  maker-scaffold00060-snap-gene-1.69-mRNA-1 115 NRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 150
                                                ****************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.1E-8103167IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-9112159No hitNo description
CDDcd147031.56E-20112158No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-11114158No hitNo description
PfamPF001702.1E-7114151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAQLPPKIPN LSPNWHDFSH QRIPSIGSMT PNITTTNSTP TNATTQNPSW VDEFLDFSSS  60
RRGSHRRSVS DSITFLEVPM LDECRGSNAP PGSGAASNEF DRFDDEQFLS IILANRQSAQ  120
RSRVRKLQYI SELERSVTSL QAEVSVLSPR VAFLDHQRLL LNVDNSALKQ RIAALAQDKI  180
FKDAHQEALK REIERLRQVY HQQNLKKMEN GAQQSQPHSD AKASIDKEQL LHV
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023928738.18e-79basic leucine zipper 61-like
SwissprotQ9M2K46e-66BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A314Y8E71e-104A0A314Y8E7_PRUYE; Basic leucine zipper 61
STRINGLus100399022e-87(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2157844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.16e-68bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]