PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold00766-augustus-gene-0.35-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family BES1
Protein Properties Length: 327aa    MW: 35062.9 Da    PI: 8.2737
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold00766-augustus-gene-0.35-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.56.4e-6721471150
                                         DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvved 64 
                                                    ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+
  maker-scaffold00766-augustus-gene-0.35-mRNA-1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEE 65 
                                                    5899************************************************************ PP

                                         DUF822  65 DGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsi 128
                                                    DGttyrkg+kp ++++++g s+sasp+ss+q        +sp++sy++sp sssfpsp+s+  +
  maker-scaffold00766-augustus-gene-0.35-mRNA-1  66 DGTTYRKGCKPVDRMDIMGGSTSASPCSSYQ--------PSPCASYNPSPGSSSFPSPVSSRYA 121
                                                    *******************************........*******************998877 PP

                                         DUF822 129 slasa....asllpvlsvlslvsssl 150
                                                     +a+      sl+p+l++ls++sss+
  maker-scaffold00766-augustus-gene-0.35-mRNA-1 122 ANAKGnadaDSLIPWLKNLSSSSSSA 147
                                                    6665467889*********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-673141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPVDRM DIMGGSTSAS PCSSYQPSPC ASYNPSPGSS SFPSPVSSRY  120
AANAKGNADA DSLIPWLKNL SSSSSSASSK LPYHLNVHGG SISAPVTPPL SSPTARTPRT  180
KNDWDDPTVA PSWAGQHYSF LPSSTPPSPG RQGLPDSRWL AGIQIPQSGP SSPTFSLVSP  240
NPFGFMEEAF SGGGSRMWTP GQSGTCSPAI PAGIDHTSDV PMSDGIAAEF AFGSNTTGLV  300
KPWEGERIHE ECVSDDLELT LGSSRTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023879306.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_023879307.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-139BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2N9IIT00.0A0A2N9IIT0_FAGSY; Uncharacterized protein
STRINGXP_009352718.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-127BES1/BZR1 homolog 4