PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

maker-scaffold01092-snap-gene-0.46-mRNA-1

Organism

Castanea mollissima

Taxonomic ID

60419

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea

Family

bZIP

Protein Properties

Length: 317aa MW: 35773.7 Da PI: 6.5744

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
maker-scaffold01092-snap-gene-0.46-mRNA-1	genome	THGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.6e-11	189	234	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ maker-scaffold01092-snap-gene-0.46-mRNA-1 189 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 234 899**********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.1E-14	185	249	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	187	239	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.29E-11	189	243	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.1E-14	189	240	No hit	No description
Pfam	PF00170	8.0E-10	189	234	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.70E-24	190	240	No hit	No description
PROSITE pattern	PS00036	0	192	207	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MAQLPPKIPS MTQNWHSTPH QRMPIIANFI PTNHNTNNNN NTQHHQQQQH PTWIDEFLDF 60 SSARRGSHRR SVSDSIAFLE APFIEECRNS STAVVMHGNN GFDRLDDEQL LSMFSDDLSV 120 PLPPTVSSSN PSTPSDHNSN IDDDNKPMPL EQQQQPKAEP GEVESSCNTD PQAPPPSATP 180 TGDSITDPKR VKRILANRQS AQRSRVRKLQ YISELERSVT TLQTEVSALS PRVAFLDHQR 240 LILNVDNSAL KQRIAALAQD KIFKDAHQEA LKKEIERLRE IYHHQNLQKM SNQNAAQPQQ 300 PPTSDRLGCT DTEQLIN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023876886.1	0.0	basic leucine zipper 61-like
Swissprot	Q9M2K4	1e-109	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A2I4H1M7	1e-170	A0A2I4H1M7_JUGRE; basic leucine zipper 61-like
STRING	XP_010279202.1	1e-146	(Nelumbo nucifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	8e-96	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]