PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold02444-snap-gene-0.25-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family bZIP
Protein Properties Length: 200aa    MW: 21342.7 Da    PI: 6.2873
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold02444-snap-gene-0.25-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.13.9e-08174196426
                                                XCHHHCHHHHHHHHHHHHHHHHH CS
                                     bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                                                 +++rr++kNRe+A rsR+RK+ 
  maker-scaffold02444-snap-gene-0.25-mRNA-1 174 QQKQRRMIKNRESAARSRERKQH 196
                                                689******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-6166196No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MLADLQRQQQ QNQSMNMDDL LKNLYSTSSD QFTEGTTSAA RVGGDKTVDE VWKELVTGTA  60
GTNADNRSKL EEISGDNGNN TAEEMILEDF LTRAGAVREE DVRLDGGGAL VPVAGGYGIN  120
GGGVGGQFGM EVENHWRIVL GGGVSAVPVP VSVVGGGGDG GGKGKKKVLD KATQQKQRRM  180
IKNRESAARS RERKQHLFHN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023895501.16e-55bZIP transcription factor 12-like
TrEMBLA0A2I4GE241e-34A0A2I4GE24_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRINGXP_009615514.12e-32(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.26e-10abscisic acid responsive elements-binding factor 2