PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

maker-scaffold05380-snap-gene-0.14-mRNA-1

Organism

Castanea mollissima

Taxonomic ID

60419

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea

Family

bZIP

Protein Properties

Length: 740aa MW: 80230.6 Da PI: 6.3672

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
maker-scaffold05380-snap-gene-0.14-mRNA-1	genome	THGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.9	4.4e-13	245	306	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ + e a+l++++ maker-scaffold05380-snap-gene-0.14-mRNA-1 245 DEEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRSMHSTIAELNSKISYIMAENATLRQQL 306 6789*****************************************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.8E-17	244	308	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-11	245	306	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.714	246	306	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.56E-12	248	306	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.5E-17	248	307	No hit	No description
CDD	cd14704	4.12E-21	249	300	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042538	Biological Process	hyperosmotic salinity response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence Send to blast
MTDHLVVEAH NLNPNNNLLS EFDSLPIPPM DSAFFETNSH NINDSEAFDS DLGFGFGFDD 60 NANFELTFDD IDDFYLPSEN EEFIISEHCL DSVQPGFEEQ VQSQPVQVSD SISGSSGVST 120 DHVGSDVSKF LNFSGSAGSA ESDYADAPAR VLNFPSPESG GSESSGGGSV SSQGSGNRPQ 180 SPNVIVVDQM IKVEEEMASK NSVSKRKKEH VEEGVGADSR TSKYRRSSES VANSVSFEAA 240 PANEDEEKRK ARLMRNRESA QLSRQRKKHY VEELEDKVRS MHSTIAELNS KISYIMAENA 300 TLRQQLSGSV PPHSGMYPHP AAMAPMGYPW MPPCAPYVVK QQGSQVPLVP IPRLKPQQPV 360 PAPKVKKTEN RKSEGKTKKV ASVSFLGLLF FVMLFGGLVP FVNVRYGGIG DKVPGGVGYV 420 SDRFYDRQLG RVLGVNEYSN GSGGSVGGGF SSGEFDNPNR VNYVRGCVRI EEYERKRQGS 480 QPLSGSDESV RLGNGSEPLV ASLYVPRNDK LVKIDGNLII HSVLASEKAM ASQAEPEKKD 540 NKETEVGGNR GRHSHVYRNP TGGQKALASG SADTLKDNLK STSADGKLQQ WFREGLAGPM 600 LSSGMCTEVF QFDASPASAP GAIIPASSVS NVPAKHLKNA TRLSKGRNRR ILNRLPIPVA 660 GSNYNITEEH VRNSSQKESF QGNKSSSMIV SVLIDPREAG DSEVDGMIAP KSLSRIFVVV 720 LMDSVKYVTY SCVLPRSGLI

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence Send to blast

MTDHLVVEAH NLNPNNNLLS EFDSLPIPPM DSAFFETNSH NINDSEAFDS DLGFGFGFDD  60
NANFELTFDD IDDFYLPSEN EEFIISEHCL DSVQPGFEEQ VQSQPVQVSD SISGSSGVST  120
DHVGSDVSKF LNFSGSAGSA ESDYADAPAR VLNFPSPESG GSESSGGGSV SSQGSGNRPQ  180
SPNVIVVDQM IKVEEEMASK NSVSKRKKEH VEEGVGADSR TSKYRRSSES VANSVSFEAA  240
PANEDEEKRK ARLMRNRESA QLSRQRKKHY VEELEDKVRS MHSTIAELNS KISYIMAENA  300
TLRQQLSGSV PPHSGMYPHP AAMAPMGYPW MPPCAPYVVK QQGSQVPLVP IPRLKPQQPV  360
PAPKVKKTEN RKSEGKTKKV ASVSFLGLLF FVMLFGGLVP FVNVRYGGIG DKVPGGVGYV  420
SDRFYDRQLG RVLGVNEYSN GSGGSVGGGF SSGEFDNPNR VNYVRGCVRI EEYERKRQGS  480
QPLSGSDESV RLGNGSEPLV ASLYVPRNDK LVKIDGNLII HSVLASEKAM ASQAEPEKKD  540
NKETEVGGNR GRHSHVYRNP TGGQKALASG SADTLKDNLK STSADGKLQQ WFREGLAGPM  600
LSSGMCTEVF QFDASPASAP GAIIPASSVS NVPAKHLKNA TRLSKGRNRR ILNRLPIPVA  660
GSNYNITEEH VRNSSQKESF QGNKSSSMIV SVLIDPREAG DSEVDGMIAP KSLSRIFVVV  720
LMDSVKYVTY SCVLPRSGLI

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023892406.1	0.0	bZIP transcription factor 17-like isoform X2
Swissprot	O22208	0.0	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	A0A2N9H7E1	0.0	A0A2N9H7E1_FAGSY; Uncharacterized protein
STRING	cassava4.1_002147m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7487	34	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-164	bZIP family protein

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]